Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01898 ATGGTCAGTTATTATTATCTATTACTAATAGATAAAGGGAATACCCATTCCGAAGTGAAAGCCTTGGACTGGGGTGAGGATGGTGTCACCACTACTGCTGAAACTGCTACTTTATCGGCACCTTTCAGACAGCAAACTGCTGTAGTTTCTTGGAGCTTCAATGGGCGGAAGAAACTTGCTTATAGGATTGTGATTCAGCTGGCTTTGGACCTCTCCAGAGGTCTTAACTATCGACATTGGAAGAGGATTGTTCATCGGGAGGTGAAAACAAAGAATATGTTGCTAGATGCTAATAGGAATCTAAAGATAGCTAATTTTGAAGTTTCTCGGGTTGAAGCTATGAATCCCAGTGACATGACTGGTGAAATTGGAACTGTTGGATACATGGCACTTGGGGTATTAATGCTGTTTTGA 414 0.4155 MVSYYYLLLIDKGNTHSEVKALDWGEDGVTTTAETATLSAPFRQQTAVVSWSFNGRKKLAYRIVIQLALDLSRGLNYRHWKRIVHREVKTKNMLLDANRNLKIANFEVSRVEAMNPSDMTGEIGTVGYMALGVLMLF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01898 137 Gene3D Transferase(Phosphotransferase) domain 1 28 136 - -
Rops10g01898 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01898 137 SUPERFAMILY Protein kinase-like (PK-like) 53 130 IPR011009 -
Rops10g01898 137 Pfam Protein kinase domain 57 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01898 137 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01898 Rops-Chr10 35060652 35062181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01898 19 134 MAP Kinase Kinase Kinase AT3G22750 47.024 5.53e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops10g01898 Pkinase 1.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01898 - K01968 thj:104803043 138.272