Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01895 ATGAAAGTGAGCCAAATAGCAAGAGATAAGTTGCTGATTGCAGTCATCAAGTCTTTTAGAGCCAAGGGATCTTTGGCTAAATCTCAAGATCCAGCCACTCTTCCTGACAGTGGATCACAGCCGTCTAATCCTTCTCAAATTGGATCTCAGCCCACTTTCAAAGTAGCAAGGTGCACAAAGATTATAAATCCAAATTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCTAAGTATATGCCAACTGGGGTTTTGCAAAAGTCAAAGGAATTGGTTGGGGTCAAGGCAGGAGTCAATCCAGCAGAAATTTGCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTAGTGAAGCTTAAAGGTCTGGACATTGATACAATCCAAAGAAAGACTACACAAAGGTGA 441 0.4172 MKVSQIARDKLLIAVIKSFRAKGSLAKSQDPATLPDSGSQPSNPSQIGSQPTFKVARCTKIINPNSEDAKYVINVKQIAKYMPTGVLQKSKELVGVKAGVNPAEICKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQRKTTQR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01895 146 ProSiteProfiles RST domain profile. 1 25 IPR022003 -
Rops10g01895 146 MobiDBLite consensus disorder prediction 26 52 - -
Rops10g01895 146 Gene3D - 101 144 - -
Rops10g01895 146 MobiDBLite consensus disorder prediction 30 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01895 Rops-Chr10 35019656 35033752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01895 103 144 Primary Pumps ATPases AT3G42640 88.095 6.09e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01895 K01535 - csin:114256495 74.7146