Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01883 ATGTGTTGTGCTAGCTTTGGTAAGAAATTCACCAAGGCAAAGCCTTATTTGTTAACTGTGGGGCTGCAGTTTGGGTTTGCAGGAGCTTACATCTTCACTATAGCCAGTCTCAACCATGGATTGAATCGTTTTGTTTTCATTGTCTATCGCAATGTTATTGCTGCACTTGCCCTCGCTCCTTTTGCATTGATTTTTGAAAGGAAAATTAGGCCAAAGATGACAATCTCTGTCTTTATGCACATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGACCAAGGGTTCACTTTCTTGGGAATGCAATATACCTCGGCTTCATTTGCATCTGCTATAATGAATGCTGTGCCCTCTGTCACCTTTGTGCTAGCCTTAATTCTCAGGTTAGAGCGTGTAAATATGAAGGAAGTACGGAGCATAGCTAAGGTGATAGGGACGTTGGTGACCTTTGCAGGCGCTTTGGGAATGATACTTTACAAAGGTCCTCTAATTCACCTATTTTATTCTCCAAACACAAGCCACCACCAAGATGGAAGTCATTCCCCTCAGAGTATCAAACATTGGGTTTCGGGCACTCTCTTTCTACTCCTCGGTTGTGTGACTTGGTCATTCTTCTACATATTACAGTCCATAACGTTGAAAAGGTATCCAGCGGAACTGTCACTGTCATGCTTGATATGCTTCGTGGGTGCTTTGCTAGCTGCCGCGGTGTCGCTGGTGGCGAACCGTCATTCTGGGTCTGGGATATGGGTCATTGGTTGGGGCTTCAGGCTCTATGGCCCTCTCTACACGGGAATAGTTACCTCAGGAATTACGTATTATGTGCAAGGGTTGGTGTTGAAAAGCAGAGACCCAGTATTTCTAACAGCGTTTAATCCCCTTTGCATGGTCATCACTTCTGCTTTAGGCTCCTTCCTTTTCGCAGAGCAGCTTCACTTGGGCAGTATCATTGGAGCCATCGTTATCGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAAGTAAAGACACTAAACCACCTTCAGCCACAACAAAGCAAATTGAGACACAACAGCTGCCAATCACCTCACCTGATATCTAA 1077 0.4522 MCCASFGKKFTKAKPYLLTVGLQFGFAGAYIFTIASLNHGLNRFVFIVYRNVIAALALAPFALIFERKIRPKMTISVFMHIMALAFLEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLALILRLERVNMKEVRSIAKVIGTLVTFAGALGMILYKGPLIHLFYSPNTSHHQDGSHSPQSIKHWVSGTLFLLLGCVTWSFFYILQSITLKRYPAELSLSCLICFVGALLAAAVSLVANRHSGSGIWVIGWGFRLYGPLYTGIVTSGITYYVQGLVLKSRDPVFLTAFNPLCMVITSALGSFLFAEQLHLGSIIGAIVIAVGLYSVVWGKSKDTKPPSATTKQIETQQLPITSPDI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01883 358 PANTHER WAT1-RELATED PROTEIN 15 336 IPR030184 GO:0016020|GO:0022857
Rops10g01883 358 Pfam EamA-like transporter family 26 155 IPR000620 GO:0016020
Rops10g01883 358 Pfam EamA-like transporter family 189 329 IPR000620 GO:0016020
Rops10g01883 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Rops10g01883 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01883 Rops-Chr10 34851357 34855377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01883 7 355 Nodulin-like Gene Family AT1G44800 50.143 6.90e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01883 - - gmx:100812537 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01883 10 34851357 34855377 Rops10g01883 10 34851357 34855377 ECH