Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01881 ATGAATGCCCAAAACATGTTTGGTAAATTTTGCCTGTTCATTGCTAATGCAAAACCATACCTGTTAATGATTGGTTTGCAATTTGGCATGGCTGGCAATTACATCTTCGGCAAAGATATTCTTAATCATGGGATGAGCCGTTTTGTGTTCATTGTCTATCGCAACGCCATGGCTACAATTGGCATTGCCCCTATCGCATTCTTTCTTGAAAGGAAAAGTAGGCCCAAGATGACACTCCCAGTCTTTCTACAAATTATGGTCCTGGGATTTCTGGAGCCAGTTTTCAATCAAAGCTTCACTTACTTGGGGATGAAGTACACTTCAGCTTCATTTACATCTGCTATTATGAATGCTGTGCCCTCCATCACCTTTCTTCTTGCTGTCATCGTCCGGTTGGAACGTGTAAAAATTAAGGAGATTCGCAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCAGGATTCAACCTTTTTCATTCTGGAAACACAACAAACCACGAAGATGAAAGCCAATCCTCTCACAACAACCACCAAACCGCTGGAGCAGTTTATATACTAATGGGTTGTGTGGCTTTGTCCTCTTTCTACATTTTGCAGTCAACAACGGTAAAAAGATACCCAGCGGAGCTATCATTGGCAAGCTTGATTTGCCTGGCGGGAGCAGCAGAAGGTGCAGCAGTGGCAATCGTGGCCGAGCGTCACACCCACGCTTGGGCTATTGGTTGGGACTATAGGCTCTATGCTCCTCTTTACACGGGACTAGTAAGCTCAGGGATTGCATACTATGTTCAAGGGCTGGTGATGAAAATGAGAGGCCCCGTATTTGCAACAGCCTTTAATCCTCTTTGCATGATCATTGTTGCTGCCTTGGGCTCCCTTATATTAGGAGAACAACTCCATCTTGGAAGTATCATTGGAAGCATTATCATCGCAGTGGGCCTTTACACGGTTGTGTGGGGCAAAGCCAAGGACTATTCAGACACCAAATTACCATCGGAACTTGCTGGGGAGACAAAGTCACTGCCAATTACAGCAACTGATGATCCCAAAATTGATATTGCTGGGAAACAGGAATTAGAGGAAGCTAACAAAGTGGAGAAAGAAACAGAGTTGTACAGGATGAAGGTTTAA 1167 0.4404 MNAQNMFGKFCLFIANAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAMATIGIAPIAFFLERKSRPKMTLPVFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVIVRLERVKIKEIRSQAKVIGTLVTFGGALLMAIYKGPGFNLFHSGNTTNHEDESQSSHNNHQTAGAVYILMGCVALSSFYILQSTTVKRYPAELSLASLICLAGAAEGAAVAIVAERHTHAWAIGWDYRLYAPLYTGLVSSGIAYYVQGLVMKMRGPVFATAFNPLCMIIVAALGSLILGEQLHLGSIIGSIIIAVGLYTVVWGKAKDYSDTKLPSELAGETKSLPITATDDPKIDIAGKQELEEANKVEKETELYRMKV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01881 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Rops10g01881 388 PANTHER WAT1-RELATED PROTEIN 18 337 IPR030184 GO:0016020|GO:0022857
Rops10g01881 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Rops10g01881 388 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
Rops10g01881 388 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01881 Rops-Chr10 34820435 34824245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01881 16 388 Nodulin-like Gene Family AT2G37460 47.745 8.02e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01881 - - gmx:100786326 593.193