Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01862 ATGAGCAAACCCAAACCCCACAGAAAACCAACCATTAGCAAGCATGTCAACCAAATCCAAAACCAACAACAACCACAGAAAACTGAGAAACAACCTTCCTGGGTGAGAGGCCTATTGGCTTGTAGAAATGTCCAAATCCAACAACAACAACAGCAGCAGAAAGAAGCAAAACCAAAACCATTACCTCTGCCAGAAGCAAAACAACCAAGGAAGAAACAGGAACAGAGAAAGCTGCAAGAGAAACGAGTCCCAGAAGAAAACAGCAAGAAATGCAAGAAGATGAAATGTTCTGGCTCACTTTGTAACAACACTGAGGTGACAGCAAAGCCTGAAACAGGAACCCCAGATATTCTTCACAAGAAAAAGGTGTCACTTGGTGGATGTAAAAATGATGCTTCAAGCAGATCCATGAAAGCTCCTCTGAATGAAATCAATGGAACTGTCTCAGCCTCTTCTTCTTCTTCATTGTCAGCATCTTCCACTACTACTTCTGCTGGTGGATCTTTCAGGGGAATGCCATTTAGGAGACTCTCCGGTTGTTATGAGTGTAGAATGGTGGTAGATCCTGTTCTTGGTTTCACAAGAGACCCTTCTCTAAGGAGTAGCATTTGTTCTTGTCCTGAATGTGGTGAGATCATGAAAACTGAAAGTTTGGAGCATCATCAAGCTGTCAAACATGCAGTTTCTGAACTGGGTCCTGAAGATACAAGCAAGAACATAGTTGAAATTATATTCCACTCAAGCTGGCTTAAGAAGCAATCTCCAGTGTGCAAAATAGACCGCATCCTTAAAGTCCACAACACCCAGAAAACAGTTACCAAATTCGAAGAGTACAGAGACTCCATCAAAGCCAAAGCCATGAAGCTCACGAAGAAACACCCTCGTTGCATAGCAGATGGCAATGAACTACTAAGGTTTCACTGCACGACCTTTGTGTGCTCACTAGGACTAAACGGTTCCTCCAACCTTTGCAACTCAACACCACAATGCAACGTGTGTAGCATAATCAAGCATGGCTTCAAGGTAAGTGGAGGAAATGGTATCTTGACAACTGCAACAAGTGGGAAGGCACATGATAAAGCAATTGTTTCACACGATGACAATGATGATAAGAGAGCAATGCTGGTTTGTCGTGTGATAGCAGGAAGGGTGAAGAAGAATACAGAAGGTGGAATGGAGGAGTATGATTCAGTTGCAGGGGCTGTTGGGGCTTTTTCTAATCTTGATGAGTTGTATGTGTTCAACCCAAGAGCTATATTGCCCTGCTTTGTTGTCATCTATAGAGGGTTTTGA 1293 0.43 MSKPKPHRKPTISKHVNQIQNQQQPQKTEKQPSWVRGLLACRNVQIQQQQQQQKEAKPKPLPLPEAKQPRKKQEQRKLQEKRVPEENSKKCKKMKCSGSLCNNTEVTAKPETGTPDILHKKKVSLGGCKNDASSRSMKAPLNEINGTVSASSSSSLSASSTTTSAGGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPECGEIMKTESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTVTKFEEYRDSIKAKAMKLTKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTPQCNVCSIIKHGFKVSGGNGILTTATSGKAHDKAIVSHDDNDDKRAMLVCRVIAGRVKKNTEGGMEEYDSVAGAVGAFSNLDELYVFNPRAILPCFVVIYRGF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01862 430 Gene3D - 227 428 - -
Rops10g01862 430 MobiDBLite consensus disorder prediction 60 89 - -
Rops10g01862 430 MobiDBLite consensus disorder prediction 145 168 - -
Rops10g01862 430 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 93 427 - -
Rops10g01862 430 MobiDBLite consensus disorder prediction 1 89 - -
Rops10g01862 430 MobiDBLite consensus disorder prediction 42 56 - -
Rops10g01862 430 MobiDBLite consensus disorder prediction 13 31 - -
Rops10g01862 430 SUPERFAMILY ADP-ribosylation 228 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01862 Rops-Chr10 34536912 34538658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01862 169 428 C2H2 Transcription Factor Family AT1G75710 53.925 1.12e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01862 - - gmx:100817333 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01862 10 34536912 34538658 Rops10g01862 10 34536912 34538658 ECH