Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01861 ATGGATGGGAAGGCTAACCTTCCGATCAAGCCTGATTCCTCTTCCCCGGACTTCCTCCGCCATGTTCAAGCCGCCTTGAAACGCCATCGTCCTCTCGGTACAATGCCGTCCAATCGTATAAGACCAAGGCGCACGCTACTTCCTCAATCACAGGACTCACTCTCAATCAGAAACAACACTTCCTCTGTTGATACTTCGGTTTCGTTTGAAAGCAACCCTCCTCAAAACGCAGATGCTCCCAAGAAAGTTCAGTTTTCAGTTCAATCCAACACTTCTGCTCCACAGGGGGCCCATGATGGAATGGCCACTGAGTTGGAGAACTTGTCATCTCACATGAGTTCACTTGGATTCACAGAAATGGAGTGGGTTGAAAGCAACCAGCTTGATGCTTCCATTGGATTCAACCAGGCTTCAAAGCACCCGAAAACTCAGCAGCCAGAGATTGACCCGGGTTTGAAATCTGATGGAGGAATAAATTCCATGTTGCCGAAAAGAACTATGGTTTCTTCGGATCCTATGCAGCAATTCAGAAGCTTTTTAAGTCAGCCAGCAACGCAATCTTCTGTGGTGGGACCTTCGTGTGCTACAACTACTTCAGTTCATTCAACTTCAGCTCCAATGCTGAATTCAACTACTCGATATTCTAGTTCACATATAGATAGTGGCTCACGAGTGGCTGCTGAAACTCTGGGGGAGCTTGATGTTAATTATAATCCTATTAATGAAGGGGTTATGGAATCACCTAATACTAAACTTAAAAAAACCAATAGAATTTCAGTTGATCAGGCAGCGAGTGAAGTCCAAGCTTCTGATTCTTGTATTGATGAAGAGTTGGTGTTTAAGGAGAGTGATCAATCTAAGGGGCAGCAAGGATGCATGTTGAAAGAAACCAGCAATTCGAGACGTGATGATGACAAGTTAATGAAAGGGAAAGGGCCTGCAGATGTTGCCAATGTAAAACCTGAGGCTCCAATGCCCAAAACCTCGTCTTCAGATGTGAAGTTGGGGTCCTCTAAGTTAGAGAAACGAGAGAAGGCTGCTAGTAGTAAAGGTTCATCAGCCGCTCGGAAAAGGACCTATGACCCAGATTTGTTTTTTAAAGTCAATGGCAAACTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCGGACTGTAATATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGTTGAAGGGAAAGGATAATATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTATTTGAAGAAGTTACGAAAGGTTCTTTCAGTAATAAGGATGGCCGAGTCAAGGATGATGGATTTATATACATGGTACTTGAATATGGGGAAATTGATTTAGCTCACATGTTGTCCCAGAAGTGGAAGGAACTGGATGGACACAACCGGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACCATTCATGAGGAACGTATTGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTCGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACAACTAACATCCAACGGGAATCACAGGTAGGTACTCTGAGTTACATGTCTCCTGAGGCATTCATGTGTAATGAGACTGATGCGAACGGAAACATCATAAAGTGTGGTCGGCCATCAGATATCTGGTCCCTAGGCTGCATCCTTTATCAAATGGTCTACGGGAGAACACCTTTTGCTGAGTACAAGACATTTTGGTCCAAATTCAAAGTTATAACAGATCCAAATCATGAAATTACGTATGAACCAGTTTCAAACCCATGGCTTATGGATCTTATGAAGAGATGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGCTACTCCAACATTCTTTTCTTGTTCCTCCTGTACCATATAATCGGTCTTTGTCCCAAGACCATGGCTGTAAATTGCTACAACTTATTGCTGAAACTTGTACATATGACCCAGAAGCATCCCAACTTTGTTGTCAGCTCCAACAATTACTTGGTGATCCACTCAAGTCAACAACTCCTCACTCACTAAATGCACGAGATCAACAACGAAAACTGCTGTCCCAAATGTCTGAACTCTGTATTCAGCTGCAAGAACGTTTGGCAAATACTGATAACAAGTAG 2256 0.4282 MDGKANLPIKPDSSSPDFLRHVQAALKRHRPLGTMPSNRIRPRRTLLPQSQDSLSIRNNTSSVDTSVSFESNPPQNADAPKKVQFSVQSNTSAPQGAHDGMATELENLSSHMSSLGFTEMEWVESNQLDASIGFNQASKHPKTQQPEIDPGLKSDGGINSMLPKRTMVSSDPMQQFRSFLSQPATQSSVVGPSCATTTSVHSTSAPMLNSTTRYSSSHIDSGSRVAAETLGELDVNYNPINEGVMESPNTKLKKTNRISVDQAASEVQASDSCIDEELVFKESDQSKGQQGCMLKETSNSRRDDDKLMKGKGPADVANVKPEAPMPKTSSSDVKLGSSKLEKREKAASSKGSSAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALFEEVTKGSFSNKDGRVKDDGFIYMVLEYGEIDLAHMLSQKWKELDGHNRTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFAEYKTFWSKFKVITDPNHEITYEPVSNPWLMDLMKRCLAWDRNQRWRIPQLLQHSFLVPPVPYNRSLSQDHGCKLLQLIAETCTYDPEASQLCCQLQQLLGDPLKSTTPHSLNARDQQRKLLSQMSELCIQLQERLANTDNK* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01861 751 MobiDBLite consensus disorder prediction 285 355 - -
Rops10g01861 751 MobiDBLite consensus disorder prediction 43 97 - -
Rops10g01861 751 CDD PKc_Mps1 371 666 IPR027084 -
Rops10g01861 751 Coils Coil 731 751 - -
Rops10g01861 751 MobiDBLite consensus disorder prediction 27 99 - -
Rops10g01861 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Rops10g01861 751 Gene3D Phosphorylase Kinase; domain 1 366 452 - -
Rops10g01861 751 SMART serkin_6 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01861 751 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Rops10g01861 751 MobiDBLite consensus disorder prediction 336 355 - -
Rops10g01861 751 Gene3D Transferase(Phosphotransferase) domain 1 487 669 - -
Rops10g01861 751 MobiDBLite consensus disorder prediction 137 159 - -
Rops10g01861 751 MobiDBLite consensus disorder prediction 297 311 - -
Rops10g01861 751 SUPERFAMILY Protein kinase-like (PK-like) 367 670 IPR011009 -
Rops10g01861 751 ProSiteProfiles Protein kinase domain profile. 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01861 751 Pfam Protein kinase domain 373 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01861 751 FunFam serine/threonine-protein kinase mph1 isoform X1 487 669 - -
Rops10g01861 751 PANTHER MIXED LINEAGE PROTEIN KINASE 57 700 - -
Rops10g01861 751 FunFam serine/threonine-protein kinase mph1 isoform X2 366 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01861 Rops-Chr10 34526692 34531175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01861 379 667 MAP Kinase Kinase Kinase AT4G08470 27.304 4.44e-22 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Rops10g01861 Pkinase 3.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01861 K08866 - gmx:100788990 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01861 10 34526692 34531175 Rops10g01861 10 34526692 34531175 ECH