Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01854 ATGGCGGTTTCCATCGACAAGCGTCTGTACCCTGGCTTCCAACACGAAGTCGTTCGGACGTTCAAGTCAAGCCCAGACGTCATGCATGTGAAGAACACACTGAAACCACCGTTGCTATCTGATTCTTCCTCAAGCGAAGAGGAGGATGGGAATTTGAAGGAGATGATTCGAAAGGGAAACGTGGAAGTGGAAGCGTCTGTGTTTGACCCTCGCGACGAGGGAACCTTGGACCACTGGATCCAACGGAGCACTTCCCTGGTGCGCCTCACTGGCAAGCACCCCTTCAACTCAGAGCCTCCACTCCAAAGCCTCATGCACCACGGTTTCATAACCCCCGTTCCCATCCACTACGTCCGTAACCATGGGCCTGTTCCCATGGCCCGTTGGGAGGACTGGACCGTCGAGGTCTGCGGCCTGGTCAAGCGCCCTGCCTACTTCACCATGGACCAGCTGGTCCATGACTTCCCCAGCCGCGAGCTCCCAGTCACCCTCGTCTGTGCCGGAAACCGCCGCAAGGAGCAAAACATGGTGAAGCAGACCATCGGCTTCGACTGGGGCGCAGCTGCCGTCTCCACTTCAGTGTGGTGTGGTGTACCTTTAAGGAGCGTGCTCAAGCGGTGTGGGATCTTTAGCCGCAGCAGGGGAGCCCTCCACGTGTGCTTCGAAGGCGCGGAGGACCTTCCAGGTGGCGGTGGGTCCAAGTATGGGACCAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGTGATATCATTCTTGCCTACATGCAAAACAGGGAGCTTTTGGCCCCTGATCATGGCTTTCCAATACGGATCATAATACCCGGATTCATCGGAGGCCGCATGGTGAAATGGTTGAAGCGCATCATCGTCACTCCACACCAATCTGACAGTTATTACCATTACAACGACAACAGGGTCCTCCCCTCCCACGTCGATCCTGAGCTTGCCAATGCAGAAGCTTGGTGGTACAAGCCGGAGTATATTATCAACGAACTGAACATAAACTCGGTGATAACGACGCCGTGTCACAATGAGATATTGCCCATAAACTCATGGACTACACAGAGGCCTTATGTACTTAGAGGCTACGCATATTCAGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTGACAATGGATGGTGGTAAAACGTGGCAACTATGCACGTTGGATCATCCGGAGAAACCCAATAAATACGGTAAGTACTGGTGCTGGTGCTTCTGGTCATTGGAGGTGGAGGTGTTGGACCTGCTTGGAGCCAAGGAGATTGTTGTGCGAGCATGGGATCAGGCCCTCAACACCCAACCTGAGAAGCTCATTTGGAATGTTACGGGCATGATGAACAACTGCTGGTTCAAAGTGAAAATCAACGTGTGCCAGCCACACAAGGGTGAGATTGGCATAGTGTTCGAGCACCCAACCCAACTAGGGAAACAATCTGGTGGCTGGATGACCAAAGAAAGACAACAGGAGAAATCATCAGATTCAAACCCAACCTTTAAGAAGAGTATCTCCTCACCCTTCGTAAACACTAGCTCAAAAATGTACACCATGTCTGAAGTCAAAAAGCACAGTAACCCCAATTCAGCTTGGATCGTTGTCCACGGCCATGTCTACGACTGCACCCCTTACCTCAAAGACCACCCTGGCGGCGCCAACAGCATCCTCATCAATACAGGCACCGACTGCACAGAGGATTTCGAAGCCATCCACTCTGACAAGGCCATGAAAATTATCGAGGATTATCGAATCGGTGAGCTCGTGGCCACCTGCGACACCTCTGATTTGTTGTCGCTGAATAACTTTATGCACGACAATTCTGATATCATCCATTTGGCTGGCATGCCGACCCAAAGCAAGTAA 1866 0.5247 MAVSIDKRLYPGFQHEVVRTFKSSPDVMHVKNTLKPPLLSDSSSSEEEDGNLKEMIRKGNVEVEASVFDPRDEGTLDHWIQRSTSLVRLTGKHPFNSEPPLQSLMHHGFITPVPIHYVRNHGPVPMARWEDWTVEVCGLVKRPAYFTMDQLVHDFPSRELPVTLVCAGNRRKEQNMVKQTIGFDWGAAAVSTSVWCGVPLRSVLKRCGIFSRSRGALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNRELLAPDHGFPIRIIIPGFIGGRMVKWLKRIIVTPHQSDSYYHYNDNRVLPSHVDPELANAEAWWYKPEYIINELNINSVITTPCHNEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTMDGGKTWQLCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIVVRAWDQALNTQPEKLIWNVTGMMNNCWFKVKINVCQPHKGEIGIVFEHPTQLGKQSGGWMTKERQQEKSSDSNPTFKKSISSPFVNTSSKMYTMSEVKKHSNPNSAWIVVHGHVYDCTPYLKDHPGGANSILINTGTDCTEDFEAIHSDKAMKIIEDYRIGELVATCDTSDLLSLNNFMHDNSDIIHLAGMPTQSK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01854 621 Gene3D - 71 322 IPR036374 -
Rops10g01854 621 SUPERFAMILY E set domains 332 459 IPR014756 -
Rops10g01854 621 Gene3D - 332 508 - -
Rops10g01854 621 PANTHER SULFITE REDUCTASE 54 462 - -
Rops10g01854 621 MobiDBLite consensus disorder prediction 33 52 - -
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 87 101 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 162 173 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 402 412 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 173 185 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 375 387 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 246 262 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 109 125 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 361 375 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 440 453 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 279 292 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 188 203 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 330 342 IPR008335 GO:0016491
Rops10g01854 621 PRINTS Eukaryotic molybdopterin domain signature 427 439 IPR008335 GO:0016491
Rops10g01854 621 SMART Cyt_b5_2 517 589 IPR001199 -
Rops10g01854 621 MobiDBLite consensus disorder prediction 480 502 - -
Rops10g01854 621 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Rops10g01854 621 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Rops10g01854 621 FunFam Nitrate reductase 73 322 - -
Rops10g01854 621 Pfam Oxidoreductase molybdopterin binding domain 121 300 IPR000572 -
Rops10g01854 621 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 138 173 IPR022407 GO:0043546
Rops10g01854 621 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Rops10g01854 621 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Rops10g01854 621 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Rops10g01854 621 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Rops10g01854 621 CDD eukary_NR_Moco 72 457 - -
Rops10g01854 621 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 69 330 IPR036374 -
Rops10g01854 621 Gene3D - 512 595 IPR036400 -
Rops10g01854 621 FunFam Nitrate reductase 332 508 - -
Rops10g01854 621 FunFam Sulfite oxidase, mitochondrial 512 592 - -
Rops10g01854 621 Pfam Cytochrome b5-like Heme/Steroid binding domain 518 588 IPR001199 -
Rops10g01854 621 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 513 589 IPR036400 -
Rops10g01854 621 Pfam Mo-co oxidoreductase dimerisation domain 328 459 IPR005066 GO:0016491|GO:0030151
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01854 Rops-Chr10 34340609 34344325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01854 515 588 NADPH P450 reductases AT5G48810 46.667 4.78e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01854 K10534 - gmx:732634 1015.76