Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01851 ATGGCGGCTTACACGGACAAGCGCCTGTACACTGCCTTTGAATACGACGTCGTTCGGACCTTCAAGCTTAGCCAGGAGGTCATGCATGGGAAGAAGAACACACTGAAACCACCATTGCTGTCTGATTCGTCAAGCGATGAGGACGATGGGAAGTTGAAGGAGCTGATTCGCAAGGGAAGTACCGAAGTGGAAGCGTCTGTGTTTGACCCTCGCGACGAGGGAACCTTGGACCACTGGATCCAAAGGAGCACTTCCCTGGTGCGCCTCACTGGCAAACACCCTTTCAACGGGGAGCCACCACTCCCAAAGCTCATGCACCACGGTTTCATCACCCCCTCCCCCCTCCACTACGTTCGCAACCATGGGCCTGTTCCCAGGGTCCGCTGGGAGGACTGGACCATCGAGGTCTGCGGCCTCGTTAAACGCCCGGCCCGTTTCACCATGGACCAGCTGGTCCATGACTTCCCCAGTCGTGAGTTCCCCGCCACCATCGTCTGCTCTTCGAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGAGCCTCGGCTTCAACTGGGGCCCAGGTGCCATCTCCACCTCCGTGTGGCGCGGTGTTCCGTTGAGGAGCGTGCTCAAGCGGTGTGGGATCTATAGCCGAGGCAGTGGGGCCCACTACGTGTGTTTCGAAGGTGGTGATGATCTGCCAGCTGACGGCGGGACCAATTACGGGACCAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATCCTCGCTTATATGCAAAACGGTGAGCTTTTGCCCTCTGATCACGGGTTTCCGGTTCGGGTCATAGTACCAGGTTTCACCGGAGGCCGCATGGTGAAATGGTTGAAGCGCATCATTGTCACTACCCACGAATCTGATAACTATTACCATTACCACGACAACAGAGTAATCCCCTCCCACGTTGATGCTGAGCTTGCCAATGCAGAAGGTTGGTTGTACAAGCCAGAGTTTGTTGTCAACGAGATGAACATAAACTCGGTGATCACGACTCCCTGCCACGATGAGATCTTACCCATCAATTCATGGACAACACAGAGGCCTTATGTAATCAGAGGTTATGCATATTCCGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTGACAATGGACGGTGGTGAAACGTGGCAACTATGCACGTTGGATCATTCGGAGAAACCTAATAAATACGGTAAGTACTGGTGCTGGTGCTTCTGGTCATTGGAGGTGGAAGTGTTGGACCTTCTAGGAACCAAGGAGATTGCAGTGCGTGCCTGGGATGAGGCCCTCAACACCCAACCTGAGAAGCTCATTTGGAATCTTATGGGCATGCTCACCAATTGCTGGTTCAGAGTAAAAACCAACGTGTGCAAGCCACACAATGGTGAGATTGGCATAGTATTCGAACACCCGATCCAACCAGGGAACCAATCTGGTGGCTGGATGGCCAAAGAAAAACAACAGGAAAAGTCATCAGAGTCTAACCAAACCCTCAAGAATAGTGTCTCTTCAGCCTTCATGAACACTAGCTCAAAAAAGTACACCATTTCTGAAGTACAAAAGCATAATAACCCCGATTCGGCTTGGATCGTTGTCCACGGCCATGTCTACGATTGCACCCCTTACCTCAAAGACCACCCAGGCGGTGCCGACAGCATCCTTATCAACGCCGGCACCGACTGTACTGAGGAGTTTGAAGCCATCCACTCCGACAAAGCCAGGAAAATACTCGAGGATTATCGAATCGGCGAGCTCATGATCACCGGCTACACCTCCGATTCGTCCACTTCATCGTCGGATAACTCTAAGCATGGTAATTCCGACATCATCAATGTGGCCCCCATCAAGGAAGTTACACCACCGCAAAGTGTGGCTCTGATAAACCCACGTGAGAAAATTCCATGCAAGCTCTTATCTAAAACGTCCATCTCCCATGACGTTAGGCTCTTTCGATTTGCTTTGCCCTGCAAGGACCAACACTTGGGATTGCCGGTAGGGAAGCACATATTCTTATATGCCACCGTTGACGGGAAGCTATGCATGCGAGCTTACACCCCAACAAGCACCAATGATGACGTGGGGTACTTCGATCTAGTGGTTAAGGTTTATTTCAAAGGGGTGCATCCCAAGTACCCTAATGGTGGCCTCATGTCTCAACACTTGGACTCACTGCCTATTGGTTCTGTATTGAACGTGAAAGGTCCACTGGGGCACATAGAGTACACTGGTAAAGGCAATTTTCTTGTTCATGGAAAACACAAGTTTGCTAAGAGGCTAGTCATGTTGGCTGGTGGAACTGGAATCACACCCATTTACCAAGTGATTCAAGCCATTCTGAAGGATCCAGAGGACGACACTGAAATGCATGTTGTATATGCGAACCGAACTGAGAATGATATATTGCTGAGGGAAGAGCTGGATGCGTGGGCCAAGAAGCATGACCGGTTCAAGGTGTGGTACGTGGTACAAGAAAGCGTAAAAGAAAGTTGGGAATACAGTGTAGGGTTCATCACAGAAAGGAACCTAAGGGAGCATATTCCACAGGCATCCCAAGATACGTTAGCATTGGCTTGTGGGTCACCACCACTGATCCAGTTTGCAGTGCAACCAAATTTGGAGAAGTTGGACTATGACATCAAAAACAACTTGCTCGTGTTTTAA 2670 0.509 MAAYTDKRLYTAFEYDVVRTFKLSQEVMHGKKNTLKPPLLSDSSSDEDDGKLKELIRKGSTEVEASVFDPRDEGTLDHWIQRSTSLVRLTGKHPFNGEPPLPKLMHHGFITPSPLHYVRNHGPVPRVRWEDWTIEVCGLVKRPARFTMDQLVHDFPSREFPATIVCSSNRRKEQNMVKQSLGFNWGPGAISTSVWRGVPLRSVLKRCGIYSRGSGAHYVCFEGGDDLPADGGTNYGTSILREVALDPSRDIILAYMQNGELLPSDHGFPVRVIVPGFTGGRMVKWLKRIIVTTHESDNYYHYHDNRVIPSHVDAELANAEGWLYKPEFVVNEMNINSVITTPCHDEILPINSWTTQRPYVIRGYAYSGGGRKVTRVEVTMDGGETWQLCTLDHSEKPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPEKLIWNLMGMLTNCWFRVKTNVCKPHNGEIGIVFEHPIQPGNQSGGWMAKEKQQEKSSESNQTLKNSVSSAFMNTSSKKYTISEVQKHNNPDSAWIVVHGHVYDCTPYLKDHPGGADSILINAGTDCTEEFEAIHSDKARKILEDYRIGELMITGYTSDSSTSSSDNSKHGNSDIINVAPIKEVTPPQSVALINPREKIPCKLLSKTSISHDVRLFRFALPCKDQHLGLPVGKHIFLYATVDGKLCMRAYTPTSTNDDVGYFDLVVKVYFKGVHPKYPNGGLMSQHLDSLPIGSVLNVKGPLGHIEYTGKGNFLVHGKHKFAKRLVMLAGGTGITPIYQVIQAILKDPEDDTEMHVVYANRTENDILLREELDAWAKKHDRFKVWYVVQESVKESWEYSVGFITERNLREHIPQASQDTLALACGSPPLIQFAVQPNLEKLDYDIKNNLLVF* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01851 889 Pfam Oxidoreductase FAD-binding domain 638 744 IPR008333 -
Rops10g01851 889 PIRSF Nitr_rd_NADH 8 888 IPR012137 GO:0006809|GO:0042128|GO:0050464
Rops10g01851 889 FunFam Nitrate reductase [NADH] 740 889 - -
Rops10g01851 889 Gene3D - 510 590 IPR036400 -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 763 782 - -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 730 744 - -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 685 692 - -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 664 675 - -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 801 812 - -
Rops10g01851 889 PRINTS Cytochrome B5 reductase signature 857 865 - -
Rops10g01851 889 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Rops10g01851 889 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 588 IPR001199 -
Rops10g01851 889 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Rops10g01851 889 FunFam Sulfite oxidase, mitochondrial 512 592 - -
Rops10g01851 889 CDD eukary_NR_Moco 72 457 - -
Rops10g01851 889 FunFam Nitrate reductase 73 322 - -
Rops10g01851 889 Pfam Mo-co oxidoreductase dimerisation domain 329 459 IPR005066 GO:0016491|GO:0030151
Rops10g01851 889 FunFam NADH-cytochrome b5 reductase 623 739 - -
Rops10g01851 889 Pfam Oxidoreductase NAD-binding domain 764 870 IPR001433 GO:0016491
Rops10g01851 889 CDD cyt_b5_reduct_like 638 889 - -
Rops10g01851 889 Gene3D - 740 889 IPR039261 -
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 685 692 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 763 782 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 857 865 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 548 558 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 801 812 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 789 798 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 833 849 IPR001709 GO:0016491
Rops10g01851 889 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Rops10g01851 889 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Rops10g01851 889 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Rops10g01851 889 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Rops10g01851 889 PANTHER SULFITE REDUCTASE 56 462 - -
Rops10g01851 889 Gene3D - 332 509 - -
Rops10g01851 889 SUPERFAMILY Riboflavin synthase domain-like 628 746 IPR017938 -
Rops10g01851 889 Gene3D - 71 321 IPR036374 -
Rops10g01851 889 MobiDBLite consensus disorder prediction 480 502 - -
Rops10g01851 889 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 138 173 IPR022407 GO:0043546
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 173 185 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 427 439 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 375 387 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 109 125 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 87 101 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 162 173 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 188 203 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 246 262 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 279 292 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 330 342 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 440 453 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 361 375 IPR008335 GO:0016491
Rops10g01851 889 PRINTS Eukaryotic molybdopterin domain signature 402 412 IPR008335 GO:0016491
Rops10g01851 889 FunFam Nitrate reductase 332 508 - -
Rops10g01851 889 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 513 589 IPR036400 -
Rops10g01851 889 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 883 IPR039261 -
Rops10g01851 889 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 633 745 IPR017927 GO:0016491
Rops10g01851 889 Pfam Oxidoreductase molybdopterin binding domain 121 300 IPR000572 -
Rops10g01851 889 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 69 324 IPR036374 -
Rops10g01851 889 SMART Cyt_b5_2 517 589 IPR001199 -
Rops10g01851 889 SUPERFAMILY E set domains 332 459 IPR014756 -
Rops10g01851 889 Gene3D Translation factors 625 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01851 Rops-Chr10 34301105 34306363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01851 630 880 NADPH P450 reductases AT5G17770 38.735 3.36e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01851 K10534 - gmx:732634 1467.21