Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01850 ATGCACCATGGTTTCATAACCCCCGTTCCCCTCCACTACGTCCGCAATCACGGGCCTGTTCCAAGGGGCCATTGGGAGGATTGGACCGTCGAGGTCTGCGGCCTGGTCAAGCGCCAGTCCCGCTTCACTATGGACCAGCTGGTCCATGACTTCCCCAGCCGCGAGTTCCCCGTCACCCTCGTCTGCGCCGGAAACCGCCTCAAGGAGCAGAACATGGTGAAGCAGAGCATAGGCTTTAACTGGGGCCCTGGTGCCGTCTCCACTTCAGTGTGGCGCGGTGTACCTTTGAGGAGCCTGCTCAAGCGGTGTGGGATCTATAGCCACGGCAAGGGGGCCCTCCACGTGTGCTTCGAAGGCGCGGAGGAGCTGCCAGGTGGTGGTGGGTCCAAGTATGGGACCAGTGTCCTGAGTGAAGTTGCACTAGATCCCTCCTGCGACATTATCCTCGCCTACATGCAAAACTGGGAGCTTTTGGCCCCTGATCATGGCTTTCCAATACGGATCATAATCCCCGGTTTCATCGGAGGCCGCATGGTGAAATGGTTGAAGCGCATCATCGTCACTCCACACCAATCTGACAGTTATTACCATTACAATGACAACAGAGTACTCCCCTCCCACGTTGATGCTGAGCTTGCCAATGCAGAAGCCTGGTGGTACAAGCCGGAGTATATTATCAACGAGTTGAACATAAACTCAGTGATAACGACGCCGTGCCACGATGAGATATTGCCCATCAACTCATGGACTATACAGACGCCTTATGTACTCAGAGGCTACGCATATTCCGGGGGTGGGAGAAAGGTGACACGTGTTGCGGTGACAATGGACGGTGGTGAAACTTGGAAACTATGCACGTTGGACCATCCGGAGAAACCCAATAAATACGGGAAGTACTGGTGCTGGTGCTTCTGGTTGTTGGAGGTGGAGATATTGGACCTGCTTGGAGCCAAGGAGATTGTTGTGCGCGCATGGGATGAGGCCCTCAACACCCAGCCTGAGAAACTCATTTGGAATGGCATGATGAACAACTGCTGGTTCAAAGTGAAAACCAAGGTGTGCAAGCCACATGAGGGTGAGATTGGCATAGTGTTTGAGCACCCAACCCAACCAGGGAACCAATCTAGTGGTTGGATGGCCAAAGAAATACAACAGGAGAAATCATCAAAGTCAAACCCAACCCTTAAAAAGAGTGTCTCTTCACCCTTCATGAACACTAGCTCAAAAATGTACACCATGTATGAAGTCAAAAAACACGATAACGTTGATTCGGCTTGGATCATCGTCCATGGCCATGTCTACGATTGCACCCGCTTCCTCAAAGACCACCATGGCAGTGCCGACAACATCCTTATTAATGTTGGCACCGACTGTACAGAGGAGTTTGACGCCATCCACTCTGATAAAGCCATGAAAATGATCGAGGATTACCGAATCGGCGAGCTCGAGACCACTAGCTACACCTTCTATTCTTCCACTTCATCGCCGAATAATTCTGTGCACGGCAACTCTAACATCGTCCACTTGGCCCCCATCAAGGAAGTTACACCACTGTGCAGTATGGCTCTGATGAACCCACGTGAGAAATTTTCATGCAAGCTTTTATCTAAAACATCCATCTCCCACGACGTTAGGCTCTTCCGATTTGCTTTACCCTCCAAAGACCAACACTTGGGATTGCCGGTAGGGAAGCACATATTCTTATATGCCACCATTGACCAGAAGCTATGCATGCGAGCTTACTCCCTAACAAGCACCAATGATGATGTGGGGTACTTCGATTTAGTGGTTAAAATTTACTTCAAAAGGGTGCATCCAAAGTACCCTAATGGTGGCCTCATGTCTCAACACTTGGACTCGCTGCCTATTGGTTCTGTTTTGAACGTGAAAGGTCCACTAGGCCTAGAGTACACTGGTAAAGGCAATTTTCTTGTTCATGGAAAACACAAGTTTGCTAAGAGGCTAGCCATGTTGGCTGGTGGGACTGGGATTACACCCATTTACCAAGTGGTCCAAGCCATTCTAAAGGACCCAGAGGACCACACAGAAATGCATGTTGTATACGTGAACCAGACTGAGAATGATATATTGCTTAGGAAAGAGCTTGATGAGTGGGCTAAGAAGCATGATCGGTTCAATGTGTGGTACACCTTCACTGCACTTGTGAAGGATTGTGGTGTATACACGGCCAAAAGGGAAGTTTTTCATGTTCTTGGGGTTGTTGTTAAAAATGGGTTTTTCTTGGATTTGTATGTGGCAACTGCATTGGTTGATATGTATGTGAAATTTGGAGTTGTGGGTAGTGCAAGGAAAATATTTGATGAAATGTCTTAG 2334 0.4906 MHHGFITPVPLHYVRNHGPVPRGHWEDWTVEVCGLVKRQSRFTMDQLVHDFPSREFPVTLVCAGNRLKEQNMVKQSIGFNWGPGAVSTSVWRGVPLRSLLKRCGIYSHGKGALHVCFEGAEELPGGGGSKYGTSVLSEVALDPSCDIILAYMQNWELLAPDHGFPIRIIIPGFIGGRMVKWLKRIIVTPHQSDSYYHYNDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHDEILPINSWTIQTPYVLRGYAYSGGGRKVTRVAVTMDGGETWKLCTLDHPEKPNKYGKYWCWCFWLLEVEILDLLGAKEIVVRAWDEALNTQPEKLIWNGMMNNCWFKVKTKVCKPHEGEIGIVFEHPTQPGNQSSGWMAKEIQQEKSSKSNPTLKKSVSSPFMNTSSKMYTMYEVKKHDNVDSAWIIVHGHVYDCTRFLKDHHGSADNILINVGTDCTEEFDAIHSDKAMKMIEDYRIGELETTSYTFYSSTSSPNNSVHGNSNIVHLAPIKEVTPLCSMALMNPREKFSCKLLSKTSISHDVRLFRFALPSKDQHLGLPVGKHIFLYATIDQKLCMRAYSLTSTNDDVGYFDLVVKIYFKRVHPKYPNGGLMSQHLDSLPIGSVLNVKGPLGLEYTGKGNFLVHGKHKFAKRLAMLAGGTGITPIYQVVQAILKDPEDHTEMHVVYVNQTENDILLRKELDEWAKKHDRFNVWYTFTALVKDCGVYTAKREVFHVLGVVVKNGFFLDLYVATALVDMYVKFGVVGSARKIFDEMS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01850 777 FunFam Nitrate reductase 1 218 - -
Rops10g01850 777 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 34 69 IPR022407 GO:0043546
Rops10g01850 777 Gene3D Translation factors 519 633 - -
Rops10g01850 777 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 694 705 IPR001709 GO:0016491
Rops10g01850 777 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 579 586 IPR001709 GO:0016491
Rops10g01850 777 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 656 675 IPR001709 GO:0016491
Rops10g01850 777 Pfam Cytochrome b5-like Heme/Steroid binding domain 413 482 IPR001199 -
Rops10g01850 777 Pfam Oxidoreductase NAD-binding domain 657 718 IPR001433 GO:0016491
Rops10g01850 777 SUPERFAMILY Riboflavin synthase domain-like 521 635 IPR017938 -
Rops10g01850 777 Gene3D - 1 227 IPR036374 -
Rops10g01850 777 PRINTS Cytochrome B5 reductase signature 579 586 - -
Rops10g01850 777 PRINTS Cytochrome B5 reductase signature 694 705 - -
Rops10g01850 777 PRINTS Cytochrome B5 reductase signature 624 638 - -
Rops10g01850 777 PRINTS Cytochrome B5 reductase signature 656 675 - -
Rops10g01850 777 PRINTS Cytochrome B5 reductase signature 558 569 - -
Rops10g01850 777 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 641 720 IPR039261 -
Rops10g01850 777 CDD eukary_NR_Moco 1 351 - -
Rops10g01850 777 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 3 226 IPR036374 -
Rops10g01850 777 Pfam Mo-co oxidoreductase dimerisation domain 224 353 IPR005066 GO:0016491|GO:0030151
Rops10g01850 777 Gene3D - 228 401 - -
Rops10g01850 777 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 527 639 IPR017927 GO:0016491
Rops10g01850 777 PRINTS Cytochrome B5 signature 433 443 IPR001199 -
Rops10g01850 777 PRINTS Cytochrome B5 signature 458 465 IPR001199 -
Rops10g01850 777 PRINTS Cytochrome B5 signature 443 457 IPR001199 -
Rops10g01850 777 PRINTS Cytochrome B5 signature 470 482 IPR001199 -
Rops10g01850 777 PANTHER SULFITE REDUCTASE 3 356 - -
Rops10g01850 777 CDD cyt_b5_reduct_like 532 717 - -
Rops10g01850 777 FunFam Sulfite oxidase, mitochondrial 406 487 - -
Rops10g01850 777 SUPERFAMILY E set domains 228 353 IPR014756 -
Rops10g01850 777 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 406 493 IPR036400 -
Rops10g01850 777 FunFam NADH-cytochrome b5 reductase 518 633 - -
Rops10g01850 777 Pfam Oxidoreductase FAD-binding domain 532 634 IPR008333 -
Rops10g01850 777 FunFam Nitrate reductase 228 402 - -
Rops10g01850 777 SMART Cyt_b5_2 411 483 IPR001199 -
Rops10g01850 777 Gene3D - 634 742 IPR039261 -
Rops10g01850 777 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 408 483 IPR001199 -
Rops10g01850 777 Gene3D - 403 487 IPR036400 -
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 84 99 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 142 158 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 298 308 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 58 69 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 5 21 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 159 172 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 175 188 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 323 335 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 69 81 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 257 271 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 226 238 IPR008335 GO:0016491
Rops10g01850 777 PRINTS Eukaryotic molybdopterin domain signature 271 283 IPR008335 GO:0016491
Rops10g01850 777 Pfam Oxidoreductase molybdopterin binding domain 17 196 IPR000572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01850 Rops-Chr10 34264678 34270696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01850 524 718 NADPH P450 reductases AT5G17770 36.041 2.75e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01850 K10534 - gmx:732634 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01850 10 34264678 34270696 Rops10g01850 10 34264678 34270696 ECH