Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01849 ATGGCGGCTTCCGTGGACCATCGTCCCTACACTGGCCTTGAACACGGCGTCGTTCGCACCTTCAAGTCATGTCCGGAGGTCATTCGCGTGAAGAACACACCAAAACCACCGTTGTTATCTGATTCCTCAAGCGATGAAGAGGATGAGAACTTGAATGAGCTGATTCGAAAGGGAAACACCGAAGTGGAAGCCTCAGTGTTTGACCCTCGCGACGAGGGAACCTTGGACAAATGGATCCAACGGAACGCTTCCATGGTGCGCCTCACTGGCAAGCACCCTTTCAACTCAGAGCCACCAATCCAACGCCTCATGCACCATGGTTTCATAACCCCCGTTCCCCTCCACTACGTCCGCAACCATGGGCCCGTTCCCAGGGCCAGCTGGGAGGATTGGACCGTCGAGGTCTGTGGCCTCGTCAAGTGCCCGGCCCGCTTCACAATGGACCAGCTGGTCCATGACTTCCCAAGCCGCGAGTTCCCAGTCACCCTCGTTTGCGCCGGAAACCGCCGTAAGGAGCAGAACATGGTGAAGCAGAGCATAGGCTTCAACTGGGGCCCTGGTGCCATCTCCACTTCAGTATGGCGCGGTGTATCTTTAAGGAGCGTCCTCAAGCGGTGTGGGATCTTTAGCCGTTCCAGGGGGGCTCTCCACGTGTGCTTCGAAGGTGCGGAGGAGCTGCCAGGTGGCGGTGGGTCCAAGTACGGGACAAGTATCCTTAGGGAGGTTGCATTGGATCCCTCCCGTGATATCATCCTCGCGTACATGCAAAATGGGGAGCTTTTAGCCCCTGATCATGGATTTCCCGTGCGGGTCATAATACCCGGTTTCATCGGAGGCCGCATGGCGAAATGGTTGAAGCGCATCATCGTCACTCCACACCAATCTGACAGTTATTACCATTACAATGACAACAAAGTGCTCCCCTCACATGTTGATGCAGAGCTAGCCAATGCAGAAGCTTGGTGGTACAAGCCGGAGTATACTATTAATGAGCTGAACATAAACTCGGTGATAACGACACCGTGCCATGATGAGATATTGCCCATCAACTCATGGACTACACAAAGGCCTTATGTACTCAGAGGTTACGCCTATTCCGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTAACAATGGACGGTGGTGAAACGTGGCAACTATGCACGTTGGACCATCCTGAGAAACCCAATAAATACGGGAAGTACTGGTGCTGGTGCTTCTGGTCATTGGAGGTGGAGGTGTTGGACCTCCTTGGAGCCAAGGAGATTGCAGGCATGATGAACAATTGCTGGTTCAAAGTGAAAACCAACGTGTGCAAGCCACATAAGGGTGAGATTGGCATAGTGTTCGAGCACCCAACCCAACCAGGGAACCAATCTGGTGGCTGGATGGCCAAGGAAAGACACCTGGAAAAATCGTCAGATTCCAACCCAACACTCAAGAAGAGTGTCTCCTCACCCTTCATGAACACTAGCTCCAAAATGTACACCATGTCTGAAGTGAAAAAGCACAATAACCCTGATTCAGCTTGGATCATTGTCCATGGCCATGTCTACGATTGCAGCCGCTTCCTCAAAGACCATCCTGGCGGCGCAGACAGCATCCTTATCAATGCCGGTACTGATTGTACGGAGGAGTTCGAGGCCATCCACTCTGACAAAGCCAAGAAAATGATTGAGGATTATCGAATCGGGGAGCTCGTGACCACCGGTTACACCTCTGATTCGTCATCACCGAATAACTCAGTGCATGGCAACTCTGACATCATCCATTTGGCCTCCATCAAGGAAGTTACACCACAACGCAGTGTGGCTCTAATAAACCCACGTGAGAAAATCTCATGCAAGCTCTTATCTAAAACTTCCATCTCCCACGACGTTAGGCTCTTTCGATTTGCGTTGCCCTCCGAGGACCAACTCCTGGGTTTGCCTGTAGGGAAGCACATATTCTTATGTGCCACCATTGACGAGAAGCTATGCATGAGAGCTTACACTCCTACAAGCACCGTAGATGAAGTGGGGTACTTTGATCTAGTGGTCAAAGTTTATTTTAAAGGGGTGCACCCAAAGTTCCCTAATGGTGGCCTCATGTCTCAACACTTGGACTCACTGCCTATTGGCTCTATGTTGGATGTGAAAGGTCCACTAGGCCACATAGAGTACACTGGTAAAGGTAACTTTCTGGTTCATGGAAAACAAAAGTTTGCCAAAAGGCTAGCCATGTTGGCTGGTGGGACCGGAATCACACCCATTTACCAAGTGGTTCAAGCCATTCTGAAGGACCCTGAGGATCACACTGAAATGCATGTTGTCTATGCAAACCGAACTGAGGATGATATATTGCTAAGGGAAGAACTGGATGCGTGGGCTAAGAAGCATGACCGATTCAAGGTGTGGTATGTGGTACAAGAAAGCATAAGAGAAGGGTGGGAATACAGTGTAGGGTTCATCACAGAAAGTATCATGAGGGAACATGTCCCACAGGCATCGCAGGATACACTGGCATTGGCTTGTGGGCCACCACCCATGATTCAGTTCGCAGTGCAGCCGAATTTGGAGAAGTTGGGTTATGACATAAAAAACAACCTGCTCTTGTTTTAG 2601 0.5071 MAASVDHRPYTGLEHGVVRTFKSCPEVIRVKNTPKPPLLSDSSSDEEDENLNELIRKGNTEVEASVFDPRDEGTLDKWIQRNASMVRLTGKHPFNSEPPIQRLMHHGFITPVPLHYVRNHGPVPRASWEDWTVEVCGLVKCPARFTMDQLVHDFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGPGAISTSVWRGVSLRSVLKRCGIFSRSRGALHVCFEGAEELPGGGGSKYGTSILREVALDPSRDIILAYMQNGELLAPDHGFPVRVIIPGFIGGRMAKWLKRIIVTPHQSDSYYHYNDNKVLPSHVDAELANAEAWWYKPEYTINELNINSVITTPCHDEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTMDGGETWQLCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAGMMNNCWFKVKTNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEKSSDSNPTLKKSVSSPFMNTSSKMYTMSEVKKHNNPDSAWIIVHGHVYDCSRFLKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMIEDYRIGELVTTGYTSDSSSPNNSVHGNSDIIHLASIKEVTPQRSVALINPREKISCKLLSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATIDEKLCMRAYTPTSTVDEVGYFDLVVKVYFKGVHPKFPNGGLMSQHLDSLPIGSMLDVKGPLGHIEYTGKGNFLVHGKQKFAKRLAMLAGGTGITPIYQVVQAILKDPEDHTEMHVVYANRTEDDILLREELDAWAKKHDRFKVWYVVQESIREGWEYSVGFITESIMREHVPQASQDTLALACGPPPMIQFAVQPNLEKLGYDIKNNLLLF* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01849 866 FunFam NADH-cytochrome b5 reductase 600 716 - -
Rops10g01849 866 FunFam Nitrate reductase 489 570 - -
Rops10g01849 866 CDD cyt_b5_reduct_like 615 866 - -
Rops10g01849 866 Gene3D - 489 571 IPR036400 -
Rops10g01849 866 SUPERFAMILY Riboflavin synthase domain-like 604 723 IPR017938 -
Rops10g01849 866 FunFam Nitrate reductase 72 321 - -
Rops10g01849 866 PIRSF Nitr_rd_NADH 422 865 IPR012137 GO:0006809|GO:0042128|GO:0050464
Rops10g01849 866 PIRSF Nitr_rd_NADH 14 424 IPR012137 GO:0006809|GO:0042128|GO:0050464
Rops10g01849 866 Gene3D - 70 321 IPR036374 -
Rops10g01849 866 Gene3D - 717 866 IPR039261 -
Rops10g01849 866 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 810 826 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 834 842 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 527 537 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 789 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 766 775 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 740 759 IPR001709 GO:0016491
Rops10g01849 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 662 669 IPR001709 GO:0016491
Rops10g01849 866 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 68 329 IPR036374 -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 834 842 - -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 662 669 - -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 707 721 - -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 740 759 - -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 641 652 - -
Rops10g01849 866 PRINTS Cytochrome B5 reductase signature 778 789 - -
Rops10g01849 866 Pfam Oxidoreductase NAD-binding domain 741 848 IPR001433 GO:0016491
Rops10g01849 866 MobiDBLite consensus disorder prediction 32 51 - -
Rops10g01849 866 SMART Cyt_b5_2 496 568 IPR001199 -
Rops10g01849 866 Pfam Mo-co oxidoreductase dimerisation domain 327 423 IPR005066 GO:0016491|GO:0030151
Rops10g01849 866 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 710 860 IPR039261 -
Rops10g01849 866 Pfam Oxidoreductase FAD-binding domain 615 721 IPR008333 -
Rops10g01849 866 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 491 571 IPR036400 -
Rops10g01849 866 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 524 531 IPR018506 GO:0020037
Rops10g01849 866 Gene3D Translation factors 602 716 - -
Rops10g01849 866 PRINTS Cytochrome B5 signature 555 567 IPR001199 -
Rops10g01849 866 PRINTS Cytochrome B5 signature 528 542 IPR001199 -
Rops10g01849 866 PRINTS Cytochrome B5 signature 518 528 IPR001199 -
Rops10g01849 866 PRINTS Cytochrome B5 signature 543 550 IPR001199 -
Rops10g01849 866 Gene3D - 331 423 - -
Rops10g01849 866 Gene3D - 424 486 - -
Rops10g01849 866 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 610 722 IPR017927 GO:0016491
Rops10g01849 866 FunFam Nitrate reductase [NADH] 717 866 - -
Rops10g01849 866 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 493 568 IPR001199 -
Rops10g01849 866 SUPERFAMILY E set domains 331 438 IPR014756 -
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Rops10g01849 866 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Rops10g01849 866 Pfam Cytochrome b5-like Heme/Steroid binding domain 497 567 IPR001199 -
Rops10g01849 866 CDD eukary_NR_Moco 71 436 - -
Rops10g01849 866 PANTHER SULFITE REDUCTASE 53 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01849 Rops-Chr10 34217644 34221536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01849 601 857 NADPH P450 reductases AT5G17770 40.385 5.33e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01849 K10534 - gmx:732634 1524.99