Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01847 ATGCATCGGATTTTCGGCCATAGGAAGAAAACCAACAGCATGGATTCCAAGAAGCTTCGAAGAAAACCCAAACTCGATCGTCGTAATGCCCTCAAGCACGTCGAATACGACGCCGGATCGTCTTCCTCTTCGTTCGACGATTCCTCCAGCTCGCTCTACACTCGTTCCATGGAGATCTACGACCGCACCAGCTTCCGAGTTGAGGGAATCGAGGGCGAGTTCGATCGAATTTGCAGGAGTTTGGGGCTTTCGGGGCCAGAAGACTTCGCTATTCCCGCAGCAGCATGGGAAGCCATGAAGGTTCGATCCTCTTCGGATATTCTCCCAAGGTTGAAGCTCAACGAAGTTGATCTTCAGGAGAAGGAAGAGGCGAAGGTAAACGAGGAGAGAAACGTGGCAGAGGAAGGTGAATTGAGTGAAGAGAGGGTTAATGTTAGGGTTAGGGTTAGAGACGAGCCTCCTGCTGAGACTAGTGGATGCTGTACTGAAAGTGGTGGCGGGGGTATTAAGGGGTTTCGTCCTCCGATGCTTAAACCGCCGCCAGGGACGAGGGTTCCGGTTGTTGATGAGACGAGCTCCACTTGGGACCTTTTGAGGGATTTGGCTCCGCAAGGTGAAGAAGGGTTACCGTCGAACCATTCCAATGATGAGGAGCGGGAGAAAGAAGAAGGGAAAGCTGGTAGGGTAAGTCCAAAGAGAGAAGAGGAGGAGGTGGATAATGCAACGAGGATTGCGGAGATTGTTGCTGGGCTTTCGGAATCGCCTTCTTTCACTACGTCAAATGAAGATGATTCTTCTAGCACTACCACCGAGCCTAGGTCCAATAATATATCTCCTAACTGGAGAATCAAGCGTACTATCACCGTAGGCACCTGGCAAAAGGGCTCGTTTTTGGGGGGTGGCTCGTTTGGATCCGTCTATGAAGGAATATCTGATGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTCGATCAAGGGAATCAGGGAAGGCAAAGTGTCTTTCAACTGGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGATAATATAGTTCAATACTATGGCACAGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTAGAAGCCTCTACCAGAGGTATACTCTTCGAGATTCCCAGGTATCTGCTTATACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCCAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCTCCTGAGGTTGTGAAAGGAAAGAACAAAGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTGCTGGAGATGTTAACGGGCCAAATTCCATACTCTGAATTTGAATCTATGCAGGCAATATATAGAATTGGAAAAGGTGAGCGACCTCCTATTCCTGATTCTCTTTCAAGAGACGCACAGGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATGATCGTCCCACTGCTGCTTTACTCTTAAACCATCCATTTGTCCAAAGGCCACTTTCGCAGTCCTCTGGTTCTTCAATTCCTTCCGTTCATGGAAGAAGGGGTTAA 1698 0.4694 MHRIFGHRKKTNSMDSKKLRRKPKLDRRNALKHVEYDAGSSSSSFDDSSSSLYTRSMEIYDRTSFRVEGIEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEVDLQEKEEAKVNEERNVAEEGELSEERVNVRVRVRDEPPAETSGCCTESGGGGIKGFRPPMLKPPPGTRVPVVDETSSTWDLLRDLAPQGEEGLPSNHSNDEEREKEEGKAGRVSPKREEEEVDNATRIAEIVAGLSESPSFTTSNEDDSSSTTTEPRSNNISPNWRIKRTITVGTWQKGSFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGNQGRQSVFQLEQEIALLSQFEHDNIVQYYGTEMDESKLYIFLELVTKGSLRSLYQRYTLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGQIPYSEFESMQAIYRIGKGERPPIPDSLSRDAQDFILQCLQVNPDDRPTAALLLNHPFVQRPLSQSSGSSIPSVHGRRG* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01847 565 FunFam Mitogen-activated protein kinase 1, putative, expressed 290 557 - -
Rops10g01847 565 ProSiteProfiles Protein kinase domain profile. 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01847 565 MobiDBLite consensus disorder prediction 153 279 - -
Rops10g01847 565 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Rops10g01847 565 Gene3D Transferase(Phosphotransferase) domain 1 291 561 - -
Rops10g01847 565 MobiDBLite consensus disorder prediction 211 242 - -
Rops10g01847 565 SMART serkin_6 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01847 565 Coils Coil 111 138 - -
Rops10g01847 565 SUPERFAMILY Protein kinase-like (PK-like) 270 549 IPR011009 -
Rops10g01847 565 MobiDBLite consensus disorder prediction 252 279 - -
Rops10g01847 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Rops10g01847 565 MobiDBLite consensus disorder prediction 1 27 - -
Rops10g01847 565 Pfam Protein kinase domain 293 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01847 565 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 553 - -
Rops10g01847 565 MobiDBLite consensus disorder prediction 1 50 - -
Rops10g01847 565 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01847 Rops-Chr10 34174504 34185971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01847 1 549 MAP Kinase Kinase Kinase AT4G08500 50.497 1.31e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops10g01847 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01847 K13414 - gmx:100819999 833.943