Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01771 ATGGCGACCGCTCCCTCGCCTCGCGAAGAGAACGTTTACATGGCGAAGCTTGCCGAGCAAGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTGTCCGCCACCGCCGACAACGAGGAACTCACGGTGGAGGAGAGGAACCTCCTCTCAGTGGCCTACAAGAACGTCATCGGAGCACGCCGTGCCTCGTGGCGTATCATCTCTTCCATCGAGCAGAAGGAGGAGAGTCGTGGCAACGAGGACCACGTCTCCGTCATCCGTGACTACCGATCCAAGATCGAGTCTGAACTCTCCAACATCTGCGACGGAATCCTCAAACTCCTTGATACTCGCCTCATTCCCGCAGCTTCTTCCGGCGATTCCAAGGTTTTCTACCTCAAGATGAAAGGTGATTACCACAGGTACCTCGCTGAGTTCAAGACCGGTGCCGAACGTAAAGAAGCTGCCGAGAGCACCCTCGCCGCATACAAATCTGCTCAGGACATTGCAAATGCGGAACTGCCTCCAACTCATCCAATTAGGCTTGGACTTGCTCTGAACTTCTCGGTGTTTTACTATGAAATTCTTAACTCTCCTGATCGTGCCTGCAACCTTGCAAAACAGGCTTTCGACGAAGCGATTGCTGAATTGGATACCCTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGATGGTGCTGATGAAATTAAAGAAGCAGCACCGAAACCGGATGAGCAGCAGTAA 783 0.5236 MATAPSPREENVYMAKLAEQAERYEEMVEFMEKVSATADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDTRLIPAASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPDEQQ* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01771 260 Coils Coil 14 41 - -
Rops10g01771 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Rops10g01771 260 SMART 1433_4 8 251 IPR023410 -
Rops10g01771 260 Gene3D - 2 251 IPR036815 -
Rops10g01771 260 FunFam 14-3-3 protein epsilon 4 251 - -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Rops10g01771 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Rops10g01771 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Rops10g01771 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Rops10g01771 260 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Rops10g01771 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Rops10g01771 260 PIRSF 14-3-3 2 250 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01771 Rops-Chr10 32965058 32967328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01771 6 260 14-3-3 family AT1G78300 91.406 7.13e-174 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01771 K06630 - gmx:100792014 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01771 10 32965058 32967328 Rops10g01771 10 32965058 32967328 ECH