Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01765 ATGAAAAGTAGAAGCGGTACCCAAGAAAACATTGTCAAGCCAATAAGATGCCAAGCTGCAATATGTAGAAAAGCAGGTGAAGCCCTTGTTATAGAAGAAGTTGAGGTAGACCCACCAAAAGCCTGGGAGGTCCGGATCAAGATTTTATGCACATCTCTCTGTCACTCTGATGTAACCTTTTGGAAAATGGATTCAGGGCCGGTTGCTCAATTTCCTAGAATTTTCGGACACGAAGCTGTGGGAGTTGTGGAGAGTGTAGGGGAGCACGTGGAAGAGATTAAAGAAGGGGACTTAGTGGTGCCAGTGTTCCTCCCTAATTGTGGGGAATGCAGAGACTGCCAAAGCCCAAAGAGCAACACATGCTCCAAGTTCGGGAATAATGGGTTGAGGTTGAACCATAACATGCCCAGAGATGGAACCAGCAGGTTCAGGGACCTGAATGGAGAAGCGGTGCACCAATTTTTCAGTGTTAGCAGCTTCTCTGAATACACCGTGGTGGATGTGACCCAGGTGGTCAAAATTAGCCATGAGCTTCCTGTTGATAAGGCTTGCTTGCTCAGTTGCGGAGTTTCAACAGGGGTGGGGGCAGCATGGAAGGTGGCTGACGTAGAACAAGGGTCCACGGTGGCTATTTTTGGGCTTGGTTCTGTAGGCCTCGCTGTTGCTGTAGCAGCAAAGCAACGAGGAGCATCAAGGATCGTAGGCGTCGATCTAAATCATGAAAAATTTGAAATAGGAAAAAGATTTGGGGTAACTGATTTTGTGAATCCCTCTACTTGCAAGGAGAAGTCAGTAAGTGAGGTGATCATGGAAATGACAAATGGAGGTGCTGATTATTGCTTCGAGTGCATAGGCTTAGCATCATTGATGGTGGAGGCTTTTAATAGTTGCCGACATGGTTGGGGGAAAACGGTGATATTGGGTGTGGAAATGCACGGCTCGCCCTTGACTTTGAATCCTTATCACATAATGAGAGGCAGAACTATCATTGGATCACTATTTGGAGGCATCAAACCCAAATCTGATATTCCCTTCCTTGCTAGGAAGTACCTAGACAAAGAGCTTAGCTTGGACGGCTTCATATCACATGAGGTGGCCTTCAAGGACATCAACAGAGCTTTCGATTATCTCCTAGAAGGAAAAAGCCTCCGCTGCATTATAAGGATGGATCATTAG 1176 0.4643 MKSRSGTQENIVKPIRCQAAICRKAGEALVIEEVEVDPPKAWEVRIKILCTSLCHSDVTFWKMDSGPVAQFPRIFGHEAVGVVESVGEHVEEIKEGDLVVPVFLPNCGECRDCQSPKSNTCSKFGNNGLRLNHNMPRDGTSRFRDLNGEAVHQFFSVSSFSEYTVVDVTQVVKISHELPVDKACLLSCGVSTGVGAAWKVADVEQGSTVAIFGLGSVGLAVAVAAKQRGASRIVGVDLNHEKFEIGKRFGVTDFVNPSTCKEKSVSEVIMEMTNGGADYCFECIGLASLMVEAFNSCRHGWGKTVILGVEMHGSPLTLNPYHIMRGRTIIGSLFGGIKPKSDIPFLARKYLDKELSLDGFISHEVAFKDINRAFDYLLEGKSLRCIIRMDH* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01765 391 Gene3D - 21 385 - -
Rops10g01765 391 Pfam Alcohol dehydrogenase GroES-like domain 43 174 IPR013154 -
Rops10g01765 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 352 IPR036291 -
Rops10g01765 391 PANTHER ALCOHOL DEHYDROGENASE 13 387 - -
Rops10g01765 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 193 332 - -
Rops10g01765 391 Gene3D - 193 332 - -
Rops10g01765 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Rops10g01765 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
Rops10g01765 391 SUPERFAMILY GroES-like 13 199 IPR011032 -
Rops10g01765 391 FunFam Alcohol dehydrogenase 6 20 206 - -
Rops10g01765 391 Pfam Zinc-binding dehydrogenase 217 336 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01765 Rops-Chr10 32919593 32924721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01765 43 377 Monolignol Biosynthesis Gene Families AT2G21730 25.664 3.37e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01765 K00121 - mnt:21395940 585.874