Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01741 ATGAGGAAGAAAAGGAAAGGAAGTGAGACTGATGCATCTACGGATGCGCCTGTTATTTTGCCCTCGAATCATGGCTCTGCTGCGTCGTCGAATTTGAAATCTCATTACTCGTTAGAGGATTGTTCTAGGCTGAAGAAGAGGTGTAAAGAAGATGCTGATACTGAGCCAGTTTCTTCTTATAAAAGTAGGCTTGCTGGCATTGCTACCGCACCGCCTTTTGGGACGTCGTCTTTGATCACTCCCGGAAGAGGTCTCAAGAGGAAGATTGGTTGCATTGATGTTGCTACCCAGGTGGGCAGGAAGAAGAAGATTGAGGATGATTATGTTTCTGGTGAGACTATCGGGCAAGGAAAGTTTGGATCTGTTTGGTTGTGTCGGTCTAGGATTAGTGGGGCAGATTATGCGTGTAAGACTCTGAGGAAGGGGGAAGAGACTGTTCATCGAGAGGTTGAGATAATGCAACACTTGTCTGGACATTCTGGGGTTGTGACACTGCAAGCAGTTTATGAAGAAGCTGAATGCTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGGCTGATTGATCAAATGGTTAAGGATGGTCCTTATTCTGAACAGCGGGCTGCTAATATACTCAAGGAAGTGATGTTAGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTTACGGCATCAGGGAAAATAAAGCTTGCAGATTTTGGCCTTGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCCGGAAGCCCTGCATATGTTGCCCCTGAAGTATTGGTGGGCAGATACTCTAAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTCCAAACAGGGATGTGGGAATTGATATCTAAACCTGCACGGGATCTCATTGGGAGAATGCTGACAAGGGATATTTCAGCGAGGATATCAGCTGATGAAGTACTCAGGCATCCATGGATATTGTTCTACACCGTGCATTCATTGACGATGCTGCCCATCAAAACAAAATTGAAGCACCAAAATGGTGCCGCATGTGGACAGCTTGTTGCTGCACCTGAACATAGGTTAGGAGGAGACAGAATAGATAATGGCTCACTTAGCAAGGTTTCATCCTCTGAAAGTTGCAATTCAGATGATCAGGATGAATGTGTGTTGATTGATGCTCTTGCCACTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGCAGGTTGTGTAGTCCCACCGGCCCGATAGTTCAGCAAAGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1401 0.4497 MRKKRKGSETDASTDAPVILPSNHGSAASSNLKSHYSLEDCSRLKKRCKEDADTEPVSSYKSRLAGIATAPPFGTSSLITPGRGLKRKIGCIDVATQVGRKKKIEDDYVSGETIGQGKFGSVWLCRSRISGADYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMVKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLVGRYSKKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQTGMWELISKPARDLIGRMLTRDISARISADEVLRHPWILFYTVHSLTMLPIKTKLKHQNGAACGQLVAAPEHRLGGDRIDNGSLSKVSSSESCNSDDQDECVLIDALATAISHVRISEPKRSRLCSPTGPIVQQSSSNMKANNLCKAF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01741 466 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 374 - -
Rops10g01741 466 CDD STKc_CAMK 107 355 - -
Rops10g01741 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Rops10g01741 466 FunFam Serine/threonine-protein kinase PEPKR2 99 421 - -
Rops10g01741 466 SMART serkin_6 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01741 466 SUPERFAMILY Protein kinase-like (PK-like) 100 372 IPR011009 -
Rops10g01741 466 ProSiteProfiles Protein kinase domain profile. 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01741 466 MobiDBLite consensus disorder prediction 15 35 - -
Rops10g01741 466 Gene3D Transferase(Phosphotransferase) domain 1 99 391 - -
Rops10g01741 466 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Rops10g01741 466 Pfam Protein kinase domain 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01741 466 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01741 Rops-Chr10 32521662 32526431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01741 100 356 EF-hand Containing Proteins AT4G35310 44.195 1.55e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops10g01741 Pkinase 8.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01741 - - gmx:100812729 825.083