Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01731 ATGCCTCACAGAGCCACTTACATTTTCCCTCGTCAGTTTCCTGATAGAGGGTTAGATGAATCTTCCAAACAGCTGTTAGATCACGAGAAGAAGAAAATCGTCAACTCAATCAAATCTGGCACTTTCGGCGTTGAAAGCGACCCTCCCAACAAAACCCCACTTTCATCAACCAAAGACGACGTCGTTGTCTCTTCCGGTGCCGTTTCCGACCTCTTCGCCGCCGGTGACAAGTTCCGAGTCAAACACAAGCAAATTTCAGCTTTCTGTGATTGGTTGATCGACAAAAAAGGAGATCACTCCAGTCTCCACCACAACCTCCGTAGCTTATTAACCTCCGAAGAGGAACGTGATCTTCTTCTTCCGCCGGAGACCGCCACTGACCGGAATTTCGACCGGCAGGTTTCGCTTCCGAGGTTATCGAGCGGGAGTAGCTATGCAGGAAGCTTGTTTTCGGGAACAACATTGGATGGCAATTTTTCCAGTGATATCAAGGAGGAAACGCCGTCGTCTCGTGTCTCCACCATTCCCACCAAACGGAAGGAAGAAAAAAACAAAGAGACATTAGCGAACAAGTGTAAAGAAAGCTACATCTTGCAACTTGCGTTGGCAAAGAGGCTTTCTTGTTTAGCAAGTCTCGTGAAGGAACCTGTTCTCACTCCTGGCACTGAAACTTGGGATGCTGAATCTGTTTCTTATCGTCTATGGGTGAGTGGGTGCTTGTCGTATTCAGACAAAATATCTGATGGTTTTTATAACATATTGGGGATGAATCCGTATCTGTGGGTTATGTGCAATGATGTTGAAGAAGGTACGCGTATACCTACTTTGATGGCACTTAAAGCTGTTGAACCTAGCGAGACATCTATGGAGGTTGTGCTTGTTGATAGGCACGAGGATTCTCGCTTGAAGCTGCTTCATGATAAAGCAGAAGAGTTGTATTCTGCTTCTGAGAATACCTTGTTGTTGGTGGAACAATTAGGAAAACTTGTTGCCATATATATGGGGGGTACGTTCCCCGTGGAGCAAGGAGATCTGCACAAGCGCTGGAAGTTTGTTAGTAAGAAGTTGAGGAATTTTCACAAGTGTGTTGTGCTTCCCATCGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCTTGTCGCATAGCTCGTGGTTGCAAGTATTGTGCTGCAGATCATAGATCCTCTTGCCTAGTCAAGATTAAAGATGAAGCCCAGCTCTCAAGGGAATATGTAGTCGACCTAGTTGGGGAACCTGGAAATGTCCATGGGCCAGATTCCACAATTAATGGAGCATATGTTTCTTCAATGCCTTCCCCGTTTCAAATTTCCCATTTAAAAAAATTACAATCACCTTATATGGATGGTGCAGCATGTTTCGATCACAATTCTGTTAATCCTGAAAGTCACCCGTATTCAGGCTGGGGACAGAATGATCAACAAGTCGAAGAAACTGACTTGCTGAAAGATCATAAGGGCTCCATTTATGCTTCAGTTGATCAAGCCTGTGAAGGAACAGATGCACATCTAATTCCTTTTGGTTTAAAAGGGAATGATGAAGAATGTGCAGTTCTAGGTTCAATTTTGCCCACCATTCATGAAGATGTTTCTCAAGCTCGTCATCCAGCCTCTGAAGCATCATTACAAGAATATCCGAGGCTTAGTGAAGATGCAGTTGTAGTACAAGAAACTTCCAACAATGAGATCACTGTAACTGGAAATTCTGCAGTAAAAAGCACTTACAAGCAATGTATACTTAGTTCATCCAGCCAGTCGAAACTAAAACTGGTAGACAATAGAATTGAAAACCAATGCTGTTTACCAGCTGGGAGTATTCCAAGATATTTGAATCTTGAACCGTCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGAATTAAAGAACGTGTTGGTGCTGGCTCATTTGGGACAGTGCACCATGCTGAATGGCATGGATCAGATGTTGCGGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGAGAAGTTTTGGATCATAGGAGAAGATTACGGATGGCTTTGGATGTGGCTAAAGGGATCAATTATCTCCATTGTCTGAAACCTCCGATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCGTCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAATCAGATGTATACAGTTTTGGAGTGATCCTGTGGGAACTTGTGACCATGCAACAACCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGCTATCCCTCCAAATATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCTGGTCAACGCCCATCTTTTGCTGGCATAGTTGAGTCACTAAAGAAGCTGCTGAAGTCTCCAGCAGAGATGATAAAAATGGGTGATACATAA 2754 0.4437 MPHRATYIFPRQFPDRGLDESSKQLLDHEKKKIVNSIKSGTFGVESDPPNKTPLSSTKDDVVVSSGAVSDLFAAGDKFRVKHKQISAFCDWLIDKKGDHSSLHHNLRSLLTSEEERDLLLPPETATDRNFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETPSSRVSTIPTKRKEEKNKETLANKCKESYILQLALAKRLSCLASLVKEPVLTPGTETWDAESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDVEEGTRIPTLMALKAVEPSETSMEVVLVDRHEDSRLKLLHDKAEELYSASENTLLLVEQLGKLVAIYMGGTFPVEQGDLHKRWKFVSKKLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDEAQLSREYVVDLVGEPGNVHGPDSTINGAYVSSMPSPFQISHLKKLQSPYMDGAACFDHNSVNPESHPYSGWGQNDQQVEETDLLKDHKGSIYASVDQACEGTDAHLIPFGLKGNDEECAVLGSILPTIHEDVSQARHPASEASLQEYPRLSEDAVVVQETSNNEITVTGNSAVKSTYKQCILSSSSQSKLKLVDNRIENQCCLPAGSIPRYLNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVHHAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEVLDHRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLAIPPNISPALASLMESCWADDPGQRPSFAGIVESLKKLLKSPAEMIKMGDT* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01731 917 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 216 906 - -
Rops10g01731 917 SUPERFAMILY Protein kinase-like (PK-like) 625 900 IPR011009 -
Rops10g01731 917 Pfam Protein tyrosine and serine/threonine kinase 647 901 IPR001245 GO:0004672|GO:0006468
Rops10g01731 917 ProSiteProfiles Protein kinase domain profile. 647 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01731 917 PRINTS Tyrosine kinase catalytic domain signature 721 734 IPR001245 GO:0004672|GO:0006468
Rops10g01731 917 PRINTS Tyrosine kinase catalytic domain signature 828 850 IPR001245 GO:0004672|GO:0006468
Rops10g01731 917 PRINTS Tyrosine kinase catalytic domain signature 762 780 IPR001245 GO:0004672|GO:0006468
Rops10g01731 917 PRINTS Tyrosine kinase catalytic domain signature 872 894 IPR001245 GO:0004672|GO:0006468
Rops10g01731 917 Pfam Ethylene-responsive protein kinase Le-CTR1 227 435 - -
Rops10g01731 917 Gene3D Transferase(Phosphotransferase) domain 1 726 913 - -
Rops10g01731 917 SMART serkin_6 647 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01731 917 MobiDBLite consensus disorder prediction 160 174 - -
Rops10g01731 917 ProSitePatterns Protein kinases ATP-binding region signature. 653 674 IPR017441 GO:0005524
Rops10g01731 917 FunFam Serine/threonine-protein kinase CTR1 726 911 - -
Rops10g01731 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Rops10g01731 917 CDD STKc_MAP3K-like 653 901 - -
Rops10g01731 917 Gene3D Phosphorylase Kinase; domain 1 640 724 - -
Rops10g01731 917 FunFam Serine/threonine-protein kinase isoform 1 637 725 - -
Rops10g01731 917 MobiDBLite consensus disorder prediction 160 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01731 Rops-Chr10 32290395 32298308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01731 1 915 MAP Kinase Kinase Kinase AT4G24480 56.707 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops10g01731 PK_Tyr_Ser-Thr 1.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01731 - - gmx:100808435 1507.27