Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01714 ATGGTCTACCCAGGTTCAATGCAATTGTCTCGTGACGTTAGGCTCAACAGTAATAATGGATTGTTTAATTTCCATCATAATCCAATGGGGGTTGGTCGATTACATTTGGTCACCATAAATCTTTTACCGCGTAGTTTGAAACAAGATTCTTCGCCACTCCATCTTTTAAGTAGAGTACATGCCCCAATAAGGTACGCGCCTTCAAGATGCAATGTTTTCGTATGTCGGTCTGTCCTAATACCAGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTAGTGTTTTTTTCACAAGGTCATATGATGCTTTATTAGGAAGCCCTGTTTTGCTTCGATTGATCCCAGCCCTTGGTATCATTGCCTTTGCTGTTTGTGGTCTTGAGCCACTCCTTCGACTCAGCAGAATTCTATTTCTTCAAAGGACTGACAGTAGTTGGAAGAAAAGTAGTTCGCAATATATTATGGCCTCTTATTTTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTCGTATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGACTAGCCAGGTTGTGAAGCAACGACTGCTGAATTTTGTGAGATCTTTGTCGACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGCAAATGACTCCAGTGATACAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATATACTGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAGGTGGTTGACTGCTGGTGGTTTGGGCACAGTTTTGCTCACTCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGTATAATGATCCATGCAACTCGGCCATTTATTATGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATTGTGAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTTACTGTAAATGTTGTGAGAAATCTGAGTCAGAAATCTCATTGGCGTATCAAGAGTTACATTTCTATCAGTCACTTGGATGTTAACAAAATTAATATTATTGTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGCAGAAATTACACAGAAGGGTCTTTTTGGAGAATGTTAATCCTGAAAGTCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAGTACCTGTGTGTTAAGGAGGCAGTCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGCTAGCCACTCCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTAACTCAGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCCAGAGCAGCAGCAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTTAATGGTGAAGATAAAGTTAAGCCTTCAACACGTGCAACTCGTGCAAATGAGGAAAAAGATGCCAAGATTGATGAAACCGTGGTATCTGACTCCAAAGGAGATGAGAATTTTGTAACAACATTAACCTCCCCACCAGGTGGTGTAAACTCCAAGGATAAATCGAAGTCAATTTCTGAGGCCCAAATCCAGAATATAGGTTCTGATAGCTCAGTTGAGAAGACCTCCAAAACCTTGCAACCTAAAAAGGAAACTGCTGTAGATGTAGGAAAGGGAAGTACAATTCCTGTACCTAAAAACCTTTCTCAAAGTGCTGTGACTGAAACTTCTTCTGTCACTACCCATGAGTCTGGCAGGGGAGAGTCTGCTTCTGCTACTTCTTCACAGTCAAAGCAAGATGAAGATAAATCTGCTGTATCTTCATCATCAGTTCGGCCTTCCTTGGAAGAGAACATTCTTCTTGGGGTTGCCCTTGAAGGGTCAAAAAGAACTCTTCCAATTGAGGAAGAAATGACTCCATCTCCTATCCCTACAGAGTCACAAGAATTTGCTGTCCAGAGGAATGGAAGTGGACCTCCTGCTAACAAGGATAATAAGAAGGATGGTCCAATGTCTTCATTTCCCACCGCAAACCTGAATGACTAG 2127 0.4198 MVYPGSMQLSRDVRLNSNNGLFNFHHNPMGVGRLHLVTINLLPRSLKQDSSPLHLLSRVHAPIRYAPSRCNVFVCRSVLIPGGGSGTPLMKSASVFFTRSYDALLGSPVLLRLIPALGIIAFAVCGLEPLLRLSRILFLQRTDSSWKKSSSQYIMASYFQPLLLWTGAMLVCRALDPLVLPSETSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEANDSSDTRNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIMNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYISISHLDVNKINIIVADMRKVLAKNPQVEQQKLHRRVFLENVNPESQALMILISCFVKTSHFEEYLCVKEAVLLDLLRVVSHHRARLATPIRTVQKIYSEANSENIPFGDTIFTRSRAAANRPFLLIEPPYKVNGEDKVKPSTRATRANEEKDAKIDETVVSDSKGDENFVTTLTSPPGGVNSKDKSKSISEAQIQNIGSDSSVEKTSKTLQPKKETAVDVGKGSTIPVPKNLSQSAVTETSSVTTHESGRGESASATSSQSKQDEDKSAVSSSSVRPSLEENILLGVALEGSKRTLPIEEEMTPSPIPTESQEFAVQRNGSGPPANKDNKKDGPMSSFPTANLND* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01714 708 Gene3D - 192 296 - -
Rops10g01714 708 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 696 IPR045042 -
Rops10g01714 708 Gene3D - 298 353 IPR023408 -
Rops10g01714 708 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Rops10g01714 708 MobiDBLite consensus disorder prediction 590 642 - -
Rops10g01714 708 MobiDBLite consensus disorder prediction 668 687 - -
Rops10g01714 708 MobiDBLite consensus disorder prediction 523 708 - -
Rops10g01714 708 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Rops10g01714 708 MobiDBLite consensus disorder prediction 527 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01714 Rops-Chr10 32073403 32083162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01714 1 679 Mechanosensitive Ion Channel Family AT1G58200 54.876 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01714 K22047 - gmx:100796022 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01714 10 32073403 32083162 Rops10g01714 10 32073403 32083162 ECH