Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01711 ATGAATAGTAGCAGAGAGGAAGCAGAACGGTTGCTGGGGCTAAGCGATAATCTGTTACAGAAGGGAGATCTCAAAGGTTCAAGGGAATTGGCCGTTATAGCTCAGGAAACGGAACCCCTTCTAGAAGCTTCCGATCAGTTACTCGCCATCATCGATGTCCTCGAAGCAGCGGAGAAACCACCCAACACCACCACCACCAACAACAACAACCACAACTTCGATTGGTACGCTATTCTTCAGGTCGATCGTTGTTCTCAAGACCTTAATCTCATAAAACAGCAGTACCGTAGGCTCGCCCTTCTTCTCCACCCTGATAAGAACCCTTTCTCCTTCGCCCTCCATGCCTTCAAGCTCGTTTCCGATGCATGGGCCGTGTTATCTGACCCGGCCCACAAGCCCATCTATGACATGGGCTTTGATCACGGCCCGTCTAGCTTTTGGACCGCGTGTCCTTATTGTTACCTTTTGTATGAGTACCCTCGGGTTTACGAGGGTTGTTGTTTGATGTGTCAGAATTGTGACAGATCGTTTCATGGGCTTTCGATTCCTTCTCTGCCGCCCATAGTGCCGGGCCAAGAAGCCTATTATTGTTCCTGGGGATGCTTTCCGATGGGCTTTGTTTTCGAAAATTTGGAGAGTGGTGGGGAAATTGAGGAACCTGCTGCGGTGGTGGCTGTTCCCAATGGGGTTGCTTCTGCTTCGAAGAAGAGAGGAAGGCCCCGGAAGGTGGTTTGA 735 0.5048 MNSSREEAERLLGLSDNLLQKGDLKGSRELAVIAQETEPLLEASDQLLAIIDVLEAAEKPPNTTTTNNNNHNFDWYAILQVDRCSQDLNLIKQQYRRLALLLHPDKNPFSFALHAFKLVSDAWAVLSDPAHKPIYDMGFDHGPSSFWTACPYCYLLYEYPRVYEGCCLMCQNCDRSFHGLSIPSLPPIVPGQEAYYCSWGCFPMGFVFENLESGGEIEEPAAVVAVPNGVASASKKRGRPRKVV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01711 244 Pfam DnaJ domain 74 136 IPR001623 -
Rops10g01711 244 SUPERFAMILY Chaperone J-domain 69 139 IPR036869 -
Rops10g01711 244 Gene3D DnaJ domain 60 146 IPR036869 -
Rops10g01711 244 SMART dnaj_3 73 131 IPR001623 -
Rops10g01711 244 CDD DnaJ 74 128 IPR001623 -
Rops10g01711 244 PRINTS DnaJ domain signature 76 94 IPR001623 -
Rops10g01711 244 PRINTS DnaJ domain signature 111 131 IPR001623 -
Rops10g01711 244 PRINTS DnaJ domain signature 95 110 IPR001623 -
Rops10g01711 244 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Rops10g01711 244 ProSiteProfiles dnaJ domain profile. 74 139 IPR001623 -
Rops10g01711 244 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01711 Rops-Chr10 32020800 32021763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01711 2 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.804 7.40e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01711 - - gmx:100802055 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01711 10 32020800 32021763 Rops10g01711 10 32020800 32021763 ECH
Rops9g01421 9 23425863 23427142 Rops10g01711 10 32020800 32021763 PCT