Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01707 ATGAAGGTGGGGGGAAGGTGGGGGGAGGAGGGTGACGGTGGTGCCACCGAAGGTGGTAGTGATGGTGATAGTGATGGTGGTGGGGGAGGTGGGGGAAAGGGACCCCTTCCTTTTACACTTGAAACTGGATACGTGGAAGTGGGTGAAACTGAAAAGGAGCAGCATGGGGAGCTCTTCTACTATTTTATTGAGTCAGAGAACAATCCTAAAGAGGATCCTCTCATGCTTTGGCTCACAGGAGGTCCACTGACATTTAAAGAAGAGGAATACAATGGGAACTTACCTAATTTGGCCTTGAGACAACACTCATGGACAAAGGTAAGTAGCATTATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACAGAACTTGCTGCTCAGCAAAGTGTCTTCAAGCAAGTTAAACATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCGGAATTTCTCTCAAATGAAATGTACATTGCTGGCGACTCATACTCCGGCCTTCCTGTCCCAGTAATTGTTCAAGAAATTTCAGATGCAAATGAAGGTGGCGTCCAACCGTGGATAAATCTCCAGGGGTACCTGCTGGGGAATCCCTTGACAACATCCACTGAAAAAAATTACGCAGTACCATTTAGTCATGGCATGGGACTAATTTCTGATGAACTCTACCAGTCACTACAAAAGAATTGTAAAGGAGAGTATATCGATGTAGAGCCCGAAAACGAGTTTTGTCTAAGAGACATCCAATCCTACAAAGAGTCTATTTCAGGAATTGAGAGATCCCATATTTTAGAACCCAAATGCCGGTACCTTCTGCCAAATCCAATGGAAGTTGCTCAGAGGAGATCTCTTATTCATAAGCCCCCAACATTCTTAGCCCTGTATAATTGTGATGCATATTCCCACTGTAACTATTGGGCCAACGATGATAATGTTGGCAAAGCAGTGCATATTCGAAAGGGAAGTATAGGGAAATGGGAGCGCTGTAACAATGACATGCCTTTTGAGTATGATATCCCTAACAGCTTCCCATATCATGTAAATCTCAGTAGAAAAGGCTATCGTTCACTGATATACAGTGGGGATCATGACATGATTGTTCCATTCCTGGCGACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTTGATGACTGGAGGCAATGGTATTCCAATGGCCAAGTAGCAGGATACACCAGGACTTACTCAAATTCGATGACATTTGCAACTGTGAAGGGTGGAGGACATACAGCTCCCGAGTACAGACCTAAAGAATGTTTTGCCATGTTTAGTAGGTGGATATCTAAGAGGCCACTGTAG 1332 0.4384 MKVGGRWGEEGDGGATEGGSDGDSDGGGGGGGKGPLPFTLETGYVEVGETEKEQHGELFYYFIESENNPKEDPLMLWLTGGPLTFKEEEYNGNLPNLALRQHSWTKVSSIIFLDLPVGTGFSYPKTELAAQQSVFKQVKHAHQFLRKWLIDHPEFLSNEMYIAGDSYSGLPVPVIVQEISDANEGGVQPWINLQGYLLGNPLTTSTEKNYAVPFSHGMGLISDELYQSLQKNCKGEYIDVEPENEFCLRDIQSYKESISGIERSHILEPKCRYLLPNPMEVAQRRSLIHKPPTFLALYNCDAYSHCNYWANDDNVGKAVHIRKGSIGKWERCNNDMPFEYDIPNSFPYHVNLSRKGYRSLIYSGDHDMIVPFLATQAWIRSLNYSIVDDWRQWYSNGQVAGYTRTYSNSMTFATVKGGGHTAPEYRPKECFAMFSRWISKRPL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01707 443 SUPERFAMILY alpha/beta-Hydrolases 32 442 IPR029058 -
Rops10g01707 443 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 427 IPR001563 GO:0004185|GO:0006508
Rops10g01707 443 FunFam Serine carboxypeptidase-like 19 30 277 - -
Rops10g01707 443 FunFam Carboxypeptidase 345 440 - -
Rops10g01707 443 FunFam Carboxypeptidase 299 442 - -
Rops10g01707 443 MobiDBLite consensus disorder prediction 1 38 - -
Rops10g01707 443 Gene3D alpha/beta hydrolase 35 442 IPR029058 -
Rops10g01707 443 Pfam Serine carboxypeptidase 33 439 IPR001563 GO:0004185|GO:0006508
Rops10g01707 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 123 IPR001563 GO:0004185|GO:0006508
Rops10g01707 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 173 IPR001563 GO:0004185|GO:0006508
Rops10g01707 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 100 112 IPR001563 GO:0004185|GO:0006508
Rops10g01707 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 410 423 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01707 Rops-Chr10 31959102 31978123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01707 306 443 Calmodulin-binding Proteins AT2G22960 67.391 6.06e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01707 K16296 - gmx:100792006 602.438