Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01705 ATGAAAGGAGAATATGTAGAGCAACATCCAAAGAGTGAACCACCTAGTATGTTCTCAAAGCTTCACCAACATCAACAACAACAACAACCTCAACACGCTCCATTCCCTCACCACCCTCTCCAACTTTCGGGGGAATGTCAAACCCCAACGGAGGATGGCGCCACCGCTCAGAAGCCAAACTCCTCAGGCGACGGTGACACCATTGAGGTCGTGAGGCGGCCCAGAGGGCGTCCACCCGGATCCAAAAACAAGCCCAAACCACCAGTTATCATAACCCGAGAACCCGAACCCGCCATGAGTCCTTATATTCTAGAAGTCTCAGCTGGAAACGACGTCGTCCAAGCCATCGCAATGTTCAGTCGTCGCAAAAACATGGGCCTTTGTGTTCTAACGGCTTCTGGAACCGTCGCTAACGTCACTCTTCGTCAACCTTCCACGACACCGGGTGCCACCGTTACTTTTCACGGCCGTTTCAATATTCTCTCCGTATCAGCCACTGTCCTTCCCCAACAATCGCCGGCGGTTCCCAACGGCTTCTCAATCTCCCTCGCGGGACCGCAGGGCCAGATCGTCGGAGGGTTGGTCGCCAGAGACTTGATAGCCGCAGGGACCGTGTTCCTTACAGCTGCTTCCTTCAACAACCCATCGTATCACAGGCTTCCGCCGGAAGAAGAGGCGCGAAACTCGGTCTCTGCCGGCGATGGACACTCGCCGCCTGTCTCCGGCGCCTGTGAAGAAAGCGGACATGGCCAAGCGGAGCCGTGTGGGATGTCCATGTACAGCTGTCACTTACCTTCGGATGTGATTTGGGCTCCGACGGCAAGACCACCACCACCTTACTGA 843 0.5552 MKGEYVEQHPKSEPPSMFSKLHQHQQQQQPQHAPFPHHPLQLSGECQTPTEDGATAQKPNSSGDGDTIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYILEVSAGNDVVQAIAMFSRRKNMGLCVLTASGTVANVTLRQPSTTPGATVTFHGRFNILSVSATVLPQQSPAVPNGFSISLAGPQGQIVGGLVARDLIAAGTVFLTAASFNNPSYHRLPPEEEARNSVSAGDGHSPPVSGACEESGHGQAEPCGMSMYSCHLPSDVIWAPTARPPPPY* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01705 280 MobiDBLite consensus disorder prediction 43 64 - -
Rops10g01705 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Rops10g01705 280 ProSiteProfiles PPC domain profile profile. 96 233 IPR005175 -
Rops10g01705 280 Gene3D - 100 232 - -
Rops10g01705 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 258 IPR014476 GO:0003680
Rops10g01705 280 MobiDBLite consensus disorder prediction 1 93 - -
Rops10g01705 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 225 - -
Rops10g01705 280 MobiDBLite consensus disorder prediction 217 249 - -
Rops10g01705 280 FunFam AT-hook motif nuclear-localized protein 100 231 - -
Rops10g01705 280 MobiDBLite consensus disorder prediction 18 34 - -
Rops10g01705 280 CDD DUF296 101 212 IPR005175 -
Rops10g01705 280 PIRSF ESCAROLA 6 269 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01705 Rops-Chr10 31894050 31895182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01705 1 280 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.544 2.77e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01705 - - gmx:100788098 408.683