Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01692 ATGGCACCCAGTTTTGATTGTGTTTCAAGCCTCCTTTGTGCAGAGGACAGTAGCATTTTCGATGATAATCATGATGAGGGTACGGTGGAGGTGTTGTACCAGGATTCGTGGCGTCCTAGGTTTCTACAAAGGAACCAGCACTTTGGTGATCCAGATGGGTTGCCATTGCAGAGTGATGAGTATTTGGCGGTGATGGTGGAAAAGGAATGTCAACACTGGCCTGGTTCTGATTACTTAAATAGGCTACAAAATGGGGATTTGGACTTTGGGGCCAGAAAGGAAGCCATTGATTGGATTGAAAAGGTACGAGCACATTTCGGTTTTGGTCCTCTCTGTGCATATCTATCAATAAATTACTTGGACCGCTTCCTTTCTGCATATGAATTACCAAAAGGAAGAGATTGGACAATACAACTGTTGGCTGTGGCGTGTTTATCTCTTGCAGCCAAAATAGAGGAAACTGAAGTTCCTTTGACTGTTGATTTGCAGGTGGGTGAATCCAAGTTTGTATTTGAAGCTAAAACCATTCAGAGAATGGAGCTTCTTGTACTGAGCACGTTGAAGTGGAGAATGCAGACAATTACTCCTTTCTCCTTCATTGACTACTTCCTTTGCAAGATCAATGATGATAGAAGTTCATTAAGATCTTCAATTTCGCGATCCATCCAACTTATTTTGAGCACCGTAAGAGGGATTGACTTTTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCTATGCATGTTGTGGAGGAAACCCAAACAGTTGATACTAGCAAAACAATATGTGATCTGATTCAACACTTAGAAAAGGAGAGATTATTGAAGTGTGTTAAAATGATTCAAGAGCTATCATCAAACAGTGTTTCTGTCCCTTGTGTGCCTCAAAGCCCAATAGGTGTGTTGGATGCTTCGTGCTTCAGCTACAAAAGTGATGACACAAATGCTGGTTCATGTGCAAATTCTTCACATAATAGCCCTGCCCCTGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGAGCAGAGCTATTGTAG 1041 0.4207 MAPSFDCVSSLLCAEDSSIFDDNHDEGTVEVLYQDSWRPRFLQRNQHFGDPDGLPLQSDEYLAVMVEKECQHWPGSDYLNRLQNGDLDFGARKEAIDWIEKVRAHFGFGPLCAYLSINYLDRFLSAYELPKGRDWTIQLLAVACLSLAAKIEETEVPLTVDLQVGESKFVFEAKTIQRMELLVLSTLKWRMQTITPFSFIDYFLCKINDDRSSLRSSISRSIQLILSTVRGIDFLEFKPSEIAAAVAMHVVEETQTVDTSKTICDLIQHLEKERLLKCVKMIQELSSNSVSVPCVPQSPIGVLDASCFSYKSDDTNAGSCANSSHNSPAPDAKRRKLNKTCGAELL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01692 346 SMART Cyclin_C_2 194 311 IPR004367 -
Rops10g01692 346 Gene3D - 75 192 - -
Rops10g01692 346 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Rops10g01692 346 SUPERFAMILY Cyclin-like 50 191 IPR036915 -
Rops10g01692 346 SMART cyclin_7 198 284 IPR013763 -
Rops10g01692 346 SMART cyclin_7 97 185 IPR013763 -
Rops10g01692 346 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Rops10g01692 346 CDD CYCLIN_AtCycD-like_rpt2 194 282 - -
Rops10g01692 346 PANTHER CYCLINS 59 287 IPR039361 -
Rops10g01692 346 Pfam Cyclin, C-terminal domain 194 290 IPR004367 -
Rops10g01692 346 FunFam D2/4-type cyclin 75 187 - -
Rops10g01692 346 SUPERFAMILY Cyclin-like 176 285 IPR036915 -
Rops10g01692 346 Pfam Cyclin, N-terminal domain 62 191 IPR006671 -
Rops10g01692 346 Gene3D - 63 281 - -
Rops10g01692 346 FunFam D6-type cyclin 188 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01692 Rops-Chr10 31763783 31766400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01692 37 321 Core Cell Cycle Gene Families AT2G22490 46.254 5.15e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01692 K18810 - gmx:547739 504.212