Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01689 ATGGGTTATCTCACTTGCAATGCAGAATCTGCAATCGCTACCTGCGATCCCCACTATTGGGATCTTAAGAAGAGAAGAAGAAACACCACCAAGAAGCACACTATCAGAGAGTTTCACTACAAGGACCTCGTCGCCGCCACGGATGACTTCTCCGGTGAAAGCTTCTTAGGCAAAGGCAGCCACGGAAGAGTTTACAGAGCAACCTTAAACGGCGGCAACCTCATCGTCGCCGTCAAAAGAACAAAGCTCTTATCAAAGCCCACACAGAAACATGCCACCAACTGCACCGGTTGCGGTAACTGTACAAGCCCAGCGGAGAACGAGATCGAGATTCTGTCTCAAGTTCAAAGCCCTCGTATCGTTAACCTCATCGGGTACTGCACAGAACCAAACGGCAATAAATTAATTGTCGTTGAGTACATGCCAAACGGTTCGCTCCACGATCTCTTGCACTCAGCAAGTAAACCGCCCGGTTGGACCCGTAGGGTCCGGTTCGCACTTCAAGTGGCCAAAGCGGTTCAGGCTTTGCACTCATCTAACCCTCCGGTTATTCACAGAGACATTAAATCCTGTAACGTTTTGATCGACGAGGGTTGGAACGCGAGGCTCGGTGACTTCGGTCTCGCTCTCAGGGGACACGTGGAGGACGTTCGTGTAAAGTGTACACCACCAGCGGGGACGTTAGGGTACCTCGACCCATGCTATCTTGCGCCTGAGGATCTCAGCACCAAGAGCGATGTCTTCAGTTTCGGGATATTGTTGTTGGAGATAATCAGCGGAAGGAACGCAATCGATGTTAATTACAGTCCTCCCTCGGTGGTCGACTGGGCGGTGCCGTTGATCAAGCGCGGTGACTTCGCCGGAATCTGTGACCGGCGGATCGGGATACCTTCGGACACGGCGGTGATGCGGCAGCTTGCGGTGCTGGCGGCGAGCTGCGTGAGATCAGCGGCGGAGAAGCGGCCGTCGATGGCGGAAGTGGTGGAGTGTTTGACACTAGCGAGGAAGAGGATTCGTTCGTCGCCGATATGGAGGAGCCTGAAGCGGCGCGTGGCGCGTGTGGAGAGCAGCGGGCAACCGTTGATGAGGTGGGAGGATTATGACTGTGACGGTGATAGGAGTGAAGAACAAGTTGTGAGGATAGTAGTGAAGGGTGGGAGAAGGAACAGGAAAGTATCCAGTGTGCCGGGTGTAGAGTACAAGAATGAACCCTCCAAGAAAGCAGTGAGGTCCAAGTCCATCGGTTCCGCTTCTGTGAGTGGGAAGAAAATGCAGCAGTACGATTCGAATCCGAAAACCGAGTATGGGATTGGGAGAAGGAAGGGAAAAATGGGAGTGACGAGGTTGAATAAGTCAAAGTCTATGGGGGTTTTGCAAGGTCCTCTGCTTTTACATTATGATGGCAGTGAGAGTGAGAATGACAATAATAATAATGATCCAATTCATTCAGCAATGTCCAAGTTGGTCATAACGGATAAGTTGGAAAAGAAAATGCTTCATAAACCCTTAGTCCACTCGCATCATTGGGAGTCTAGCCTTCTGAATCATTAA 1551 0.5126 MGYLTCNAESAIATCDPHYWDLKKRRRNTTKKHTIREFHYKDLVAATDDFSGESFLGKGSHGRVYRATLNGGNLIVAVKRTKLLSKPTQKHATNCTGCGNCTSPAENEIEILSQVQSPRIVNLIGYCTEPNGNKLIVVEYMPNGSLHDLLHSASKPPGWTRRVRFALQVAKAVQALHSSNPPVIHRDIKSCNVLIDEGWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSTKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKRGDFAGICDRRIGIPSDTAVMRQLAVLAASCVRSAAEKRPSMAEVVECLTLARKRIRSSPIWRSLKRRVARVESSGQPLMRWEDYDCDGDRSEEQVVRIVVKGGRRNRKVSSVPGVEYKNEPSKKAVRSKSIGSASVSGKKMQQYDSNPKTEYGIGRRKGKMGVTRLNKSKSMGVLQGPLLLHYDGSESENDNNNNDPIHSAMSKLVITDKLEKKMLHKPLVHSHHWESSLLNH* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01689 516 ProSiteProfiles Protein kinase domain profile. 50 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01689 516 MobiDBLite consensus disorder prediction 409 432 - -
Rops10g01689 516 Pfam Protein tyrosine and serine/threonine kinase 55 331 IPR001245 GO:0004672|GO:0006468
Rops10g01689 516 SUPERFAMILY Protein kinase-like (PK-like) 29 332 IPR011009 -
Rops10g01689 516 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Rops10g01689 516 Gene3D Phosphorylase Kinase; domain 1 34 140 - -
Rops10g01689 516 FunFam Serine/threonine-protein kinase-like protein 141 344 - -
Rops10g01689 516 MobiDBLite consensus disorder prediction 397 438 - -
Rops10g01689 516 SMART serkin_6 50 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01689 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Rops10g01689 516 PANTHER OS01G0253100 PROTEIN 25 334 - -
Rops10g01689 516 Gene3D Transferase(Phosphotransferase) domain 1 141 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01689 Rops-Chr10 31606253 31608435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01689 17 342 Receptor kinase-like Gene Family AT3G59420 42.598 3.61e-71 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops10g01689 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01689 - - cam:101503747 705.286