Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01636 ATGACGGTGAAGGTCGCGGAGGTGGAGAACGGCGTTGACAGAGAGGAGAGGGAGAGAAACAGCATCAATTTGCGGTTGCATCGTTTGGTTTTACGGCAGAGAGCCAAGACAGATGTCAAGGGAAATGAAGTAGGTAGCACCAGCAGGAGGAGGAGAAATTTTAAGGAGCTTTCTGATGATGAATATAACAGAAGAATGAGGGAAGGACAGTGTTTTAGATGTGATGAGAAATTTTTCCCAGGGTATGTGTGTAAAGATAAGCAGCTGAGGATGCTCCTAGTGGAAGCGGAGGTTGATGGAGATGTTGATTTGTTGCAGGGTGATGGTGCTGTGGATGCAAAAGGGGAGAAGCCCTTACATCTAGGGTATAATATTTTAATTGGTCTTACATCAAAAAGGTCATTTGAACTTTGGGGGGAATTGTTGGGAGAGCAAGTGGAGGTTCTAATAGACTGTGGAGCATCTGACAGTTTCATTGCTCTAAAAATAGTCAAGAAATTAATGGTGCAGGCAGTAGATCCCCCCTATGTTTTGGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCTCTCTTTATGGCTATTGGTAACATTCTTGGATATGCAACTGGATCATACAGTGGTTGGCACAAGGTCTTTACTTTCACAGTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAATCTGCTTTCTTTCTCGACATTGGTTTCATTGCGGTCACGACCTGTATCAGCATTATGGCAGCTCATGAAGTGCCTCTAAGTTCAAGTGGGGCTCCCCATGCTGAAGGAATGACAGGGGAGTCGGGTAGTGCAGAAGAAGCTTTTCTGTGGGAGCTATTTGGGACAGTCAGATATTTTACAACCCCTGTATGGACAATATTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTATTCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATGAAGGTCCTAACTACGATGCTGGAGTTAGAATGGGGGCGCTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTACTCATGGAGAGGCTATGCAGGAACCGGGGGGCTGGGTTTGTGTGGGGAATCTCAAATATCCTAATGGCTGCCTGCTTTATTGCATTGCTTGTAGTAACCTATTTGGCAAATAAAATTGGCTATGTAGGCAAAGATCTACCACCAACTGGCATTGTGATAGCTGCATTGATAATCTTTACCATTCTTGGGTTTCCACTGGCGATCACTTACAGTGTTCCATATGCTTTAATTTCCACACATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGAGTCCTAAATCTTGCTATAGTGATTCCGCAGATGGTGGTGTCCTTGGGAAGTGGGCCATGGGATCAGCTATTTGGTGGGGGAAACTCTCCAGCCTTTGCTGTGGGAGCTGTTGCAGCCCTTGTCAGTGGCCTCATAGCTGTCTTGTATATTCGCCAAACTGGTGCTCAAAAGCCTAGAAGCCATGTATAA 1542 0.4462 MTVKVAEVENGVDREERERNSINLRLHRLVLRQRAKTDVKGNEVGSTSRRRRNFKELSDDEYNRRMREGQCFRCDEKFFPGYVCKDKQLRMLLVEAEVDGDVDLLQGDGAVDAKGEKPLHLGYNILIGLTSKRSFELWGELLGEQVEVLIDCGASDSFIALKIVKKLMVQAVDPPYVLGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWHKVFTFTVTPACNISCANLKSAFFLDIGFIAVTTCISIMAAHEVPLSSSGAPHAEGMTGESGSAEEAFLWELFGTVRYFTTPVWTILSVTALTWIGWFPFILFDTDWMGREIYGGEPNEGPNYDAGVRMGALGLLLNSVVLGITSLLMERLCRNRGAGFVWGISNILMAACFIALLVVTYLANKIGYVGKDLPPTGIVIAALIIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVIPQMVVSLGSGPWDQLFGGGNSPAFAVGAVAALVSGLIAVLYIRQTGAQKPRSHV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01636 513 SUPERFAMILY MFS general substrate transporter 185 505 IPR036259 -
Rops10g01636 513 Coils Coil 5 25 - -
Rops10g01636 513 PANTHER SUGAR TRANSPORTER 182 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01636 Rops-Chr10 30023169 30034791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01636 180 509 Sucrose Transporter Gene Family AT1G09960 69.091 1.32e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01636 K15378 - gmx:100787939 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01636 10 30023169 30034791 Rops10g01636 10 30023169 30034791 ECH