Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01633 ATGTTCGCTTCCCCACGAGTCCTTCCTCTTCTTCTTCTTCTCCTTTTCCTCTCACTACTCACTAGTGTCAAACCAGACGAGCGTCAAATTCTACTGAACCTAAAAACCTCACTTCAGAAATCAAATTCCATACTCTTTGACTCATGGAATGCCAACAATCCCATGTGCAGTTTCCACGGTGTCACTTGCAACACCGACGGTTCCGTCACCGAAATCAAACTTCCCAAACAAAAGCTATCTGGGGTTCTCCCTTTGGACTCACTCTGCAACCTTAAATCGCTAGAGAAACTGGCATTGGGTTTCAACAACTTGCATGGCAGAGTTTCAGAGGATATCAGAAACTGTGTCAAACTGCGTTACTTGGACTTCGGAAACAACGATTTCTCAGGACCTTTTCCTGATATTTCTCCTCTCAACAAATTGCAGTACTTGTTTGTTAACAAAAGTGGATTTTCAGGAACTTTTCCATGGCAGTCTCTGTTAAACATGACGGGTATGTTGCAGTTAAGTGTTGGAGATAACCCTTTCGATCTCACGCCTTTTCCCAAAGAGGTGTTGAGCCTCAAGAACTTGAATTGGCTCTACCTATCTAATTGCACCCTGGGAGGGAAAATACCAGTTGGGATTGGAAACCTCACGGAGCTGACCGAATTAGAATTCTCCGACAATTTCATCACCGGCGAGTTTCCGGCGGAGATTGTGAATCTTCGGAAACTGTGGCAGCTAGAATTCTTCAACAACTCCTTCACGGGAAAGATTCCCATCGGGTTAAGAAACCTCACGGGGCTTCAAAATCTTGATGGGTCAATGAATCACCTCGAAGGGGATCTCTCTGAGTTGAGGTTCTTGACCACTCTGGTTTCACTTCAATTCTTCGAGAACAACCTTTCTGGGGAGATTCCACCTGAGTTTGGCGAGTTCAAACAACTCAAGAGCTTGTCTTTGTACAGAAACAGATTAACGGGTACTATTCCTCAGAAGATTGGTTCTTGGGCTGATTTTGATTTCATCGACGTGTCGGAGAATTTCTTAACAGGTTCTATTCCGCCGGATATGTGCAAGAAGGGAAAGATGACCGCACTTCTCGTGCTTCAGAACAACCTCACCGGTGAGATTCCGGCAAACTATGGAAACTGTTTGACTCTGAAACGGTTCAGAGTCAGCAGAAACTCGCTCTCTGGTACTATCCCTCCAGGGATATGGGGATTACCCAACACTGATATAATTGATATTGAACTGAATCAGTTAGAAGGTTCAGTTTCTTCAGATATCCAAAAGGCCAAAACACTGGCCAGTATATTTGCCAGAAAGAACCGTTTGTCCGGTGAAATACCAGAAGAAATCTCAAAAGCGACGTCGTTGGTGACTATCGACCTGAGCGAGAATCAAATAACAGGGAACATGCCAGAAGGGATTGGTGAGCTTAAACAACTGGGTAACCTTCATTTACAGAACAACCACTTATCTGGTTCAATACCAGACTCTTTAGGTTCATGTAACTCTCTCAACGACGTTGATTTATCAAGGAATTCACTTTCTCATAAAATCCCTTCTTCATTGGGTTCCTTGCCGGCTTTGAATTCTCTGAATCTTTCACAGAATGAACTCTCCGGTGAAATCCCGGTGAGTTTAGCATCCCTCAGGCTAAGCCTCTTTGATCTATCGCATAACAAGTTAAAGGGTCCAATACCACAAGCTTTAACTATCCAAGCTTACAATGGAAGCCTCACCGGAAACCCAGGTCTCTGCACCCTCAACGGTCTCAGCTCCTTCCCACGTTGCTCTGCTACCTCTGGCTTGTCAAAAGACGCTCGTGCCCTCGTCATTTGCTTCACAATAGCTTTTGTCTTTCTACTATCTTGTTTGGGTCTTTACTTGAGGTTGAAGAAGAAGGAGAATAAGGAGGAGGAGAAATATGGAAGAGGAAGGTCTCTAAAGGAAGAATCTTGGGATGTTAAATCCTTCCACGTGTTAAGTTTCACTGAGGGTGAGATTCTTGATTCCATCAAACAAGAGAATCTAATAGGGACAGGGGGTTCAGGGAATGTATATAGAGTCACTCTCTCCAATGGGAAAGAACTAGCAGTGAAGCATATCTGGAATACCGATTTCAGCGCAAGGAAAAAGTCATGGAGTAGCACTCCGATGCTTGGAAAGCGTGAATATGGCTACACCTACAAAGTGAATGAGAAAAGTGATGTGTACAGCTTTGGGGTGGTCTTAATGGAGCTGGTAACTGGTAAGAGGCCAATTGAACCAGAATTTGGAGAAAACAAGGACATAGTTAGATGGGTCCATAGCAAGGCACATAGCAAAGAGGGGTTTAGGAGTGTGGTGGAATCAAGAATCCCAGAGATGTATAAAGAGGAAGCATGCAAGGTTTTAAGAACCGCAGTTCTCTGCACTGCAACTCTTCCAGCTCTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGAGCCTTGTAAATTGGTTGGAATTGTCATTAGCAAAAATGGCAGTGGAAAGAAAATAGGAGTGAACGACAAATAA 2541 0.4404 MFASPRVLPLLLLLLFLSLLTSVKPDERQILLNLKTSLQKSNSILFDSWNANNPMCSFHGVTCNTDGSVTEIKLPKQKLSGVLPLDSLCNLKSLEKLALGFNNLHGRVSEDIRNCVKLRYLDFGNNDFSGPFPDISPLNKLQYLFVNKSGFSGTFPWQSLLNMTGMLQLSVGDNPFDLTPFPKEVLSLKNLNWLYLSNCTLGGKIPVGIGNLTELTELEFSDNFITGEFPAEIVNLRKLWQLEFFNNSFTGKIPIGLRNLTGLQNLDGSMNHLEGDLSELRFLTTLVSLQFFENNLSGEIPPEFGEFKQLKSLSLYRNRLTGTIPQKIGSWADFDFIDVSENFLTGSIPPDMCKKGKMTALLVLQNNLTGEIPANYGNCLTLKRFRVSRNSLSGTIPPGIWGLPNTDIIDIELNQLEGSVSSDIQKAKTLASIFARKNRLSGEIPEEISKATSLVTIDLSENQITGNMPEGIGELKQLGNLHLQNNHLSGSIPDSLGSCNSLNDVDLSRNSLSHKIPSSLGSLPALNSLNLSQNELSGEIPVSLASLRLSLFDLSHNKLKGPIPQALTIQAYNGSLTGNPGLCTLNGLSSFPRCSATSGLSKDARALVICFTIAFVFLLSCLGLYLRLKKKENKEEEKYGRGRSLKEESWDVKSFHVLSFTEGEILDSIKQENLIGTGGSGNVYRVTLSNGKELAVKHIWNTDFSARKKSWSSTPMLGKREYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEPEFGENKDIVRWVHSKAHSKEGFRSVVESRIPEMYKEEACKVLRTAVLCTATLPALRPTMRAVVQKLEDAEPCKLVGIVISKNGSGKKIGVNDK* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01633 846 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 470 590 - -
Rops10g01633 846 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Rops10g01633 846 SUPERFAMILY L domain-like 41 348 - -
Rops10g01633 846 Gene3D Phosphorylase Kinase; domain 1 643 718 - -
Rops10g01633 846 FunFam Leucine-rich receptor-like protein kinase family protein 183 279 - -
Rops10g01633 846 SUPERFAMILY L domain-like 271 593 - -
Rops10g01633 846 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Rops10g01633 846 Gene3D Ribonuclease Inhibitor 469 588 IPR032675 -
Rops10g01633 846 Gene3D Ribonuclease Inhibitor 353 468 IPR032675 -
Rops10g01633 846 SUPERFAMILY Protein kinase-like (PK-like) 721 819 IPR011009 -
Rops10g01633 846 Pfam Protein tyrosine and serine/threonine kinase 725 819 IPR001245 GO:0004672|GO:0006468
Rops10g01633 846 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Rops10g01633 846 FunFam Leucine-rich receptor-like protein kinase family protein 280 376 - -
Rops10g01633 846 ProSitePatterns Protein kinases ATP-binding region signature. 675 708 IPR017441 GO:0005524
Rops10g01633 846 FunFam Inactive leucine-rich repeat receptor-like protein kinase 377 469 - -
Rops10g01633 846 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Rops10g01633 846 SUPERFAMILY Protein kinase-like (PK-like) 658 701 IPR011009 -
Rops10g01633 846 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
Rops10g01633 846 Gene3D Ribonuclease Inhibitor 281 352 IPR032675 -
Rops10g01633 846 Gene3D Transferase(Phosphotransferase) domain 1 719 829 - -
Rops10g01633 846 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 720 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01633 Rops-Chr10 29977396 29980785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01633 721 839 Receptor kinase-like Gene Family AT1G09970 66.387 2.63e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops10g01633 PK_Tyr_Ser-Thr 1.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01633 - - gmx:100779554 1099.35