Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01632 ATGGTCTTTGTTATTGGACTTGTTGTTTCAATGACTAGTGTGTCAGGGGTTATCAGCAGTAGCAGCAACCAGTCTGAGTTTTTTTCTCTGATGAAGGAGTCTCTCTCAGGGAATTATCCACTGAATTGGGATGTTACAATTGGGAAACCCGTTTGCAACTTCACTGGAGTTACCTGCAACAACAAAGGAGATGTTATCAATCTTGACCTTTCAGGTTGGTCACTTTCTGGGAAGTTCCCATCAGATATATGCTCTTATTTGTCAGAGTTGCGTGCTCTACGCCTTGCACTCACGAGGTTCAAGTTTCCTATAGACAGCATACTCAACTGTTCTCACTTGGAAGAGCTTAACATGACTTATATGTATCAAACTGGCACACTTCCAGATTTCTCTTCTATGAAATCTCTTAGGATACTTGATTTGTCCTACAACCTTTTCACTGGTGAATTTCCCATGTCAGTTTTTAACCTTACAAATCTAGAGACGCTGAACTTCAATGAAAATGGAGGTTTCGGTCTGTGGAAGCTACCATTGAATATTGACAGGCTGCAAAATCTGAAGTCCATGGTGTTGACAACATGCATGTTGCATGGCCAAATCCCATCATCCATAGGAAACATCACTTCTCTTGTTGATCTTGAATTGAGTGGGAATTTCCTCTCAGGCCAAATTCCTCCAGAGCTTGGTTTGCTCAAAAACTTGCAACAGCTTGAGCTTTACTATAACCAACATCTTGTTGGTAATATACCTGAGGAGCTAGGAAATCTCACAGAGCTCAGAGATTTGGATATGTCAGTGAACAAGTTGACAGGGAGTATCCCAGTATCCATATGGAGCCTTCCAAAGCTTCAAGTCTTTCAACTTTACAACAATAGCCTCTCAGGAGAAATCCCAGGTGTGATTGAAAACTCAACAACCTTAAGAATGCTATCTCTTTATGACAATTTTTTCAGAGGACATGTCCCCAGGAAACTGGGACAGTTCTCAAGAATGATAGTCCTAGACTTGTCAGAAAACAGTCTATCTGGTCCTTTGCCAACAGAAGTTTGTAAAGGAGGTACACTACAGTACTTTCTTGTTTTGGATAACAAGTTTTCTGGAGAGATACCAGAGAGTTATGCAAACTGCATGATGTTGTTGAGGTTTAGAGTTAGTAATAACCGTTTGGAGGGTTCAATTCCGGAGGGACTACTTGGTCTACCTCATGTTTCAATCATTGATTTGAGTAGCAATAATTTGACTGGTCCAATTCCCGAGATAAATGGTAATTCTAGAAACTTGTCTGAACTGTTCCTACAAAGGAACAAGATTTCAGGAGTCATAACTCCTACAATCTCTCGAGCCATTAACCTTGTCAAGATTGACTTCAGCTATAACCTTCTTTCTGGTCCAATCCCTTCAGAAATTGGCAACCTGAGAAGGCTTAATTTGCTTATGTTACAAGGAAACAAGTTGAGTTCTTCCATCCCCAGTTCACTTTCCTCCTTGGGATCCCTCAACCTTCTTGATCTCTCCAACAACCTTTTAACTGGGATCATCCCTGAAAGCCTCTCTGTACTGTTACCAAACTCCATTAACTTCTCACACAATTTGCTTTCTGGTCCAATTCCTCCCAAGTTGATCAAGGGAGGTTTGGTTGAAAGCTTTGCAGGTAATCCAGGTCTGTGTGTGCTCCCAGTATATGCTAACTCATCAGATCGAAACTTCCCCATATGTTCACATGCCTACAACAAGAGTAAGAGGATAAACACCATCTGGGTAGCTGGGATATCAGTGGTTTTAATCTTTATTGGAGCTGTCTTGTTTCTTAAACGTAGATGCTGTAAAGAGACAGCTGCAGTGGAGCATGAGGACACACTATCTTCTTCATTCTTTTCTTATGATGTTAAGAGCTTTCACAAGATCACTTTCGACCAAAGGGAGATCCTTGAATCCTTGGTGGATAAGAATATAATGGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTTGCAGTTAAGAGGCTGTGGAGTAGTAAATCAAAGGATTATCCAGAGGATCGATTATTTATGGACAAGGCATTGAAAGCAGAGGTTGAGACCCTGGGAAGTATAAGACACAAGAACATAGTCAAACTATACTGCTGCTTCTCAAGTTTGGATTGCAGCTTGTTGGTGTATGAGTACATGCCAAATGGTACTTTATGGGATTCACTTCACAAAGGTTGGATCCATTTGGATTGGCCTACTCGCTATAGGATTGCACTGGGGATTGCCCAGGGTCTTGCATACCTTCACCATGATTTGGTTTTTCCTATTATCCATCGAGATATCAAATCAACTAATATCCTTTTGGATGTTGATTACCATCCCAAAGTTGCAGACTTTGGGATAGCCAAGGTTTTGCAAGCAAGAGGGGGGAAGGATTCCACAACAACTGTTATTGCAGGAACATATGGTTACTTAGCCCCAGAATATGCATATTCAGCAAGGGCCACCACCAAGTGTGATGTTTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACAGGGAAAAAACCCGTTGAGGCAGAATTTGGAGAGAACAGAAATATTGTCTTCTGGGTTTCAAACAAAGTAGAGGGCAAGGAAGGTGCTAGACCAAGTGAGGTATTTGATCCTACATTATCATGTTCATTCAAGGATGACATGATTAAAGTGTTGCGGATTGCCATTCGTTGCACCTACAAAGCACCAGCTAGTAGACCAACAATGAAAGAGGTTGTTCAGCTTTTGATTGAGGCAGAGCCACGCTCTTCTGATTCTTGCAAGTTGTCAACCAAAGATACATCAAATGTCACCATAATAAAGAAACCTTTTGAATTATAA 2868 0.4114 MVFVIGLVVSMTSVSGVISSSSNQSEFFSLMKESLSGNYPLNWDVTIGKPVCNFTGVTCNNKGDVINLDLSGWSLSGKFPSDICSYLSELRALRLALTRFKFPIDSILNCSHLEELNMTYMYQTGTLPDFSSMKSLRILDLSYNLFTGEFPMSVFNLTNLETLNFNENGGFGLWKLPLNIDRLQNLKSMVLTTCMLHGQIPSSIGNITSLVDLELSGNFLSGQIPPELGLLKNLQQLELYYNQHLVGNIPEELGNLTELRDLDMSVNKLTGSIPVSIWSLPKLQVFQLYNNSLSGEIPGVIENSTTLRMLSLYDNFFRGHVPRKLGQFSRMIVLDLSENSLSGPLPTEVCKGGTLQYFLVLDNKFSGEIPESYANCMMLLRFRVSNNRLEGSIPEGLLGLPHVSIIDLSSNNLTGPIPEINGNSRNLSELFLQRNKISGVITPTISRAINLVKIDFSYNLLSGPIPSEIGNLRRLNLLMLQGNKLSSSIPSSLSSLGSLNLLDLSNNLLTGIIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDRNFPICSHAYNKSKRINTIWVAGISVVLIFIGAVLFLKRRCCKETAAVEHEDTLSSSFFSYDVKSFHKITFDQREILESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSSKSKDYPEDRLFMDKALKAEVETLGSIRHKNIVKLYCCFSSLDCSLLVYEYMPNGTLWDSLHKGWIHLDWPTRYRIALGIAQGLAYLHHDLVFPIIHRDIKSTNILLDVDYHPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSARATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPTLSCSFKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPRSSDSCKLSTKDTSNVTIIKKPFEL* 956
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01632 955 Gene3D Phosphorylase Kinase; domain 1 629 729 - -
Rops10g01632 955 SUPERFAMILY Protein kinase-like (PK-like) 633 925 IPR011009 -
Rops10g01632 955 Gene3D Ribonuclease Inhibitor 172 275 IPR032675 -
Rops10g01632 955 FunFam receptor protein-tyrosine kinase CEPR1 629 729 - -
Rops10g01632 955 Pfam Protein kinase domain 648 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01632 955 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 730 943 - -
Rops10g01632 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Rops10g01632 955 Gene3D Ribonuclease Inhibitor 24 171 IPR032675 -
Rops10g01632 955 SUPERFAMILY L domain-like 375 565 - -
Rops10g01632 955 Gene3D Transferase(Phosphotransferase) domain 1 730 950 - -
Rops10g01632 955 FunFam Leucine-rich repeat receptor-like protein kinase 173 276 - -
Rops10g01632 955 FunFam Receptor protein-tyrosine kinase CEPR1 280 566 - -
Rops10g01632 955 PANTHER RECEPTOR-LIKE PROTEIN 55 286 925 - -
Rops10g01632 955 Gene3D Ribonuclease Inhibitor 287 566 IPR032675 -
Rops10g01632 955 ProSiteProfiles Protein kinase domain profile. 646 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01632 955 SUPERFAMILY L domain-like 179 417 - -
Rops10g01632 955 SMART serkin_6 646 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01632 955 SUPERFAMILY L domain-like 46 242 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops10g01632 Rops-Chr10 29950328 29953920 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01632 20 931 Receptor kinase-like Gene Family AT5G49660 65.251 0.0 1195
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops10g01632 Pkinase 1.3e-46 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01632 - - lja:Lj1g3v2096140.1 1592.02