Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01608 ATGTCCAAAATACCCCTCTTCTCTCTGAAATTCCCTCTTCATTTGTTCCTCTTGCTCAGCGTCGCACTACCCTCCCAAGTAATTTCGCAAACCACAACCACCGAAGAAACAATACTACTCACCCTGAAACGCCAACTTGGGGATCCAACGTCGCTCCGATCATGGAAACCGTCGTCATCCTCGCCGTGTGACTGGACGGAGATCCGGTGCACCGGAGGCTCCGTCACGGAGCTCCTCCTCCCAAGCAAAAGCATCACCACACAGAAGCTCCCTGCCAAAATCTGCGACCTCAAGAACCTCACCATGCTGGACCTCTCCAACAACTCCATCGCCGGCGAGTTTCCGACATTCTTGTACAACTGCACCAACCTCCGGTACCTCGACCTGTCCCAGAACTACTTCGCCGGTCCAATTCCCGCCGACATCGACAACCTCAAAACTCTAACATTCCTCAATCTCGGCGGCAACAGTTTCTCAGGCGATGTCCCGCCGGAGATAGGGAGGCTCCGGGATTTGCAAACACTGCACCTCTATCAGAACAACTTCAATGGAACCTTCCCGAAGGAAATAGGGGACTTGTCCAACCTTGAAATCCTTGGTTTGGCTTATAACTACAGGTTGGTACCCATGGCGGTTCCATTCGAGTTCGGGAACCTGAGAAATTTAAGGTTCATGTGGTTAAAACAGTGTAACTTGATCGGGAAGATTCCAGAAAGCTTCGGGAATCTCGCAAACCTGGAGCAGTTGGATTTGTCGTTGAACAATTTGACAGGAAGCATTCCTAGTAGTTTGTTCTCGCTAAGGAACTTGAAGTTTTTGTACCTGTTCCGTAATAGGTTGTCGGGTGTGCTACCCAGTTCGGTGAAGGCTCTGAATTTGACCCTAATAGATTTGGCCATGAACAATTTGACGGGTCCCATTCCTCAAGAATTTGGAAAGTTGCAAAATTTGACGATATTGCATGTGTACTCGAATCAGTTGTCTGGTCAGATTCCAAGCAACTTAGGCCTAATTCCAAGTCTTGAGAACTTCAGGGTTTTTGACAATAAGTTGAATGGAACATTGCCTCCAAAACTAGGCCTTTATTCGAAGCTTGTAGCGTTTGAAGTTTCTGATAATCAACTCATTGGTGGGTTGCCAGAACATTTGTGTGCCGGTGGTGCTTTGCTTGGTGTCATTGCTTTTAACAACAATTTTAGTGGAGACTTGCCTCCATGGCTTGGGAATTGTGTTTCTCTCACCACGGTTCAGCTTTTCGGTAACAAGTTTTCAGGGGAGGTTCCTTTGGGTTTGTGGACTTTGAGGAAACTATCAACCTTGATGTTAAGCGACAACTCCTTTTCTGGTCAACTTCCGGATAAATTATCTTGGAATATGTCGAGACTTGAGATCAGAAACAACAATTTTTCAGGTAAAATATCTCTTGGAATTTCTTCTGCAAAAAATCTAGTAGTTTTTGATGCAAGAAACAACAAGCTTTCGGGTGAGATTCAAAGGGAACTGACGGGTCTTTCTCGGCTTACTACTCTCATGCTTGATGGTAATCAACTTTCTGGTGCACTTCCATCGGAGATAATCTCATGGCAATCACTGGATACTTTAACAGTCTCAAGAAACAATATTTCTGGCCAAATCGCAGTAGCTATGGCTGCTCTTCCTAACCTGGTTTACTTGGACTTATCTGAAAATGACATATCTGGTGAAATCCCACCCCAGCTTGCCAATTTGAGGTTTATTTTTCTCAACTTGTCCTCCAACAATCTTTCTGGGAACATCCCTGATGAATTTAATAACCTCGCATATGAAAATAGTTTCTTGACCAATCCTCATCTGTGTGCTTACAATAAAATACTCAACCTTTCTAGCTGCTTGGCCAAAACACCACCACCACACACCAGCAATTCGTCTTCGAAGTTCCTTGCCCTGATTCTTGCTGTCACCTTCATTGTTTTGTTGTTGGCTCCTGCCTCGTTGGTCTTCTACACGTTGAGAAAGCAGAGAGGCAAAAATCACAGGGGCCGTAAGCTTTCAACATGGAGGCTTACCTCATTCCATAGGCTTGATCTCACTGAAATTAATCTCTTCTCAAGTTTAACAGATAATAACCTTATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCGGGTGAGTATGTTGCAGTGAAAAAGATTAGGGATTGCAAAAATCTGAATGACAAGGTGGAGAAAGAATTTATGGCTGAGGTTGAAATCCTGGGCAATATTCGGCATTCCAATATAGTGAAGCTTTTGTGTTGTTATTCAAGTGAGAACTCCAAACTTCTTGTTTATGAACACATGGTAAACCAGAGCCTGGACAAATGGCTTCATCGAAAGAAGAGAACATCAGCTACAGGGTTGAGTTCACCCAACAAGAATCACGTGGTGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATTGGGGCTGCACAAGGCCTCTGTTACATGCACCATGATTGCTCACCTCCAATCATCCACCGAGATATCAAATCTAGCAATATACTGCTGGACTCTGAGTTCAAGGCTTGTATAGCAGATTTTGGACTTGCCAAGATGTTGGCAAAGCCTGGGGAGTCACACACCATGTCTGCTCTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTATTCAACCAAGATTAACGAGAAAGTTGATGTATATAGCTTTGGAGTTGTACTCCTAGAGCTAGTGACGGGAAGAGAGCCTAATAGTGGGGGCGAGCATGCCTGCAGCTTAGTTGATTGGGCATGGCAACATTATAGCGAAGGGAAGTGCCTTAGTGATGCTTTCGATGAGGATATCAAAGAAACAAGTCATGAGGAAGAGATGACTTGCGTCTTCAAATTAGGTCTCATTTGCACAAGCACATTACCCTCAACCAGGCCTTCCGCGAAGGAGATTTTGCATGTTTTTCATCAATGTTGTCTTCCAGGTTCTGCTCGTAAAAGAGTGGCAACTGAGTTTGATGTCACTCCTCTTCTTGGCAATACAACGTACATTTCCAATTACAAGGATAGTAATGCTGTAAGCGAAAGTGGAGAAAGCAGCTTTTATAGGGTGTAA 3102 0.4458 MSKIPLFSLKFPLHLFLLLSVALPSQVISQTTTTEETILLTLKRQLGDPTSLRSWKPSSSSPCDWTEIRCTGGSVTELLLPSKSITTQKLPAKICDLKNLTMLDLSNNSIAGEFPTFLYNCTNLRYLDLSQNYFAGPIPADIDNLKTLTFLNLGGNSFSGDVPPEIGRLRDLQTLHLYQNNFNGTFPKEIGDLSNLEILGLAYNYRLVPMAVPFEFGNLRNLRFMWLKQCNLIGKIPESFGNLANLEQLDLSLNNLTGSIPSSLFSLRNLKFLYLFRNRLSGVLPSSVKALNLTLIDLAMNNLTGPIPQEFGKLQNLTILHVYSNQLSGQIPSNLGLIPSLENFRVFDNKLNGTLPPKLGLYSKLVAFEVSDNQLIGGLPEHLCAGGALLGVIAFNNNFSGDLPPWLGNCVSLTTVQLFGNKFSGEVPLGLWTLRKLSTLMLSDNSFSGQLPDKLSWNMSRLEIRNNNFSGKISLGISSAKNLVVFDARNNKLSGEIQRELTGLSRLTTLMLDGNQLSGALPSEIISWQSLDTLTVSRNNISGQIAVAMAALPNLVYLDLSENDISGEIPPQLANLRFIFLNLSSNNLSGNIPDEFNNLAYENSFLTNPHLCAYNKILNLSSCLAKTPPPHTSNSSSKFLALILAVTFIVLLLAPASLVFYTLRKQRGKNHRGRKLSTWRLTSFHRLDLTEINLFSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIRDCKNLNDKVEKEFMAEVEILGNIRHSNIVKLLCCYSSENSKLLVYEHMVNQSLDKWLHRKKRTSATGLSSPNKNHVVLSWPTRLKIAIGAAQGLCYMHHDCSPPIIHRDIKSSNILLDSEFKACIADFGLAKMLAKPGESHTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGREPNSGGEHACSLVDWAWQHYSEGKCLSDAFDEDIKETSHEEEMTCVFKLGLICTSTLPSTRPSAKEILHVFHQCCLPGSARKRVATEFDVTPLLGNTTYISNYKDSNAVSESGESSFYRV* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01608 1033 ProSiteProfiles Protein kinase domain profile. 698 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01608 1033 SMART LRR_typ_2 314 338 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 552 576 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 243 267 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 97 121 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 504 528 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 169 193 IPR003591 -
Rops10g01608 1033 SMART LRR_typ_2 434 458 IPR003591 -
Rops10g01608 1033 Pfam Leucine rich repeat N-terminal domain 36 70 IPR013210 -
Rops10g01608 1033 FunFam Receptor-like protein kinase HSL1 isoform A 32 184 - -
Rops10g01608 1033 ProSitePatterns Protein kinases ATP-binding region signature. 704 728 IPR017441 GO:0005524
Rops10g01608 1033 Gene3D Transferase(Phosphotransferase) domain 1 778 996 - -
Rops10g01608 1033 Pfam Leucine rich repeat 231 280 IPR001611 GO:0005515
Rops10g01608 1033 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Rops10g01608 1033 SUPERFAMILY L domain-like 38 380 - -
Rops10g01608 1033 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 213 979 - -
Rops10g01608 1033 SUPERFAMILY RNI-like 292 600 - -
Rops10g01608 1033 PRINTS Leucine-rich repeat signature 100 113 - -
Rops10g01608 1033 PRINTS Leucine-rich repeat signature 243 256 - -
Rops10g01608 1033 FunFam Leucine-rich repeat receptor-like protein kinase TDR 311 625 - -
Rops10g01608 1033 ProSiteProfiles Leucine-rich repeat profile. 554 577 IPR001611 GO:0005515
Rops10g01608 1033 Gene3D Ribonuclease Inhibitor 185 290 IPR032675 -
Rops10g01608 1033 Gene3D Ribonuclease Inhibitor 459 645 IPR032675 -
Rops10g01608 1033 SUPERFAMILY Protein kinase-like (PK-like) 691 983 IPR011009 -
Rops10g01608 1033 ProSiteProfiles Leucine-rich repeat profile. 245 267 IPR001611 GO:0005515
Rops10g01608 1033 SMART serkin_6 698 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01608 1033 Pfam Protein kinase domain 700 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01608 1033 Gene3D Ribonuclease Inhibitor 291 384 IPR032675 -
Rops10g01608 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Rops10g01608 1033 FunFam Receptor-like protein kinase HSL1 678 777 - -
Rops10g01608 1033 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 284 - -
Rops10g01608 1033 FunFam Kinase family with leucine-rich repeat domain-containing protein 778 1000 - -
Rops10g01608 1033 Gene3D Phosphorylase Kinase; domain 1 681 777 - -
Rops10g01608 1033 Gene3D Ribonuclease Inhibitor 32 184 IPR032675 -
Rops10g01608 1033 Gene3D Ribonuclease Inhibitor 385 458 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01608 Rops-Chr10 29663219 29666705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01608 21 1007 Receptor kinase-like Gene Family AT5G25930 53.939 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops10g01608 Pkinase 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01608 - K00924 adu:107461025 1444.87