Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g01608 | ATGTCCAAAATACCCCTCTTCTCTCTGAAATTCCCTCTTCATTTGTTCCTCTTGCTCAGCGTCGCACTACCCTCCCAAGTAATTTCGCAAACCACAACCACCGAAGAAACAATACTACTCACCCTGAAACGCCAACTTGGGGATCCAACGTCGCTCCGATCATGGAAACCGTCGTCATCCTCGCCGTGTGACTGGACGGAGATCCGGTGCACCGGAGGCTCCGTCACGGAGCTCCTCCTCCCAAGCAAAAGCATCACCACACAGAAGCTCCCTGCCAAAATCTGCGACCTCAAGAACCTCACCATGCTGGACCTCTCCAACAACTCCATCGCCGGCGAGTTTCCGACATTCTTGTACAACTGCACCAACCTCCGGTACCTCGACCTGTCCCAGAACTACTTCGCCGGTCCAATTCCCGCCGACATCGACAACCTCAAAACTCTAACATTCCTCAATCTCGGCGGCAACAGTTTCTCAGGCGATGTCCCGCCGGAGATAGGGAGGCTCCGGGATTTGCAAACACTGCACCTCTATCAGAACAACTTCAATGGAACCTTCCCGAAGGAAATAGGGGACTTGTCCAACCTTGAAATCCTTGGTTTGGCTTATAACTACAGGTTGGTACCCATGGCGGTTCCATTCGAGTTCGGGAACCTGAGAAATTTAAGGTTCATGTGGTTAAAACAGTGTAACTTGATCGGGAAGATTCCAGAAAGCTTCGGGAATCTCGCAAACCTGGAGCAGTTGGATTTGTCGTTGAACAATTTGACAGGAAGCATTCCTAGTAGTTTGTTCTCGCTAAGGAACTTGAAGTTTTTGTACCTGTTCCGTAATAGGTTGTCGGGTGTGCTACCCAGTTCGGTGAAGGCTCTGAATTTGACCCTAATAGATTTGGCCATGAACAATTTGACGGGTCCCATTCCTCAAGAATTTGGAAAGTTGCAAAATTTGACGATATTGCATGTGTACTCGAATCAGTTGTCTGGTCAGATTCCAAGCAACTTAGGCCTAATTCCAAGTCTTGAGAACTTCAGGGTTTTTGACAATAAGTTGAATGGAACATTGCCTCCAAAACTAGGCCTTTATTCGAAGCTTGTAGCGTTTGAAGTTTCTGATAATCAACTCATTGGTGGGTTGCCAGAACATTTGTGTGCCGGTGGTGCTTTGCTTGGTGTCATTGCTTTTAACAACAATTTTAGTGGAGACTTGCCTCCATGGCTTGGGAATTGTGTTTCTCTCACCACGGTTCAGCTTTTCGGTAACAAGTTTTCAGGGGAGGTTCCTTTGGGTTTGTGGACTTTGAGGAAACTATCAACCTTGATGTTAAGCGACAACTCCTTTTCTGGTCAACTTCCGGATAAATTATCTTGGAATATGTCGAGACTTGAGATCAGAAACAACAATTTTTCAGGTAAAATATCTCTTGGAATTTCTTCTGCAAAAAATCTAGTAGTTTTTGATGCAAGAAACAACAAGCTTTCGGGTGAGATTCAAAGGGAACTGACGGGTCTTTCTCGGCTTACTACTCTCATGCTTGATGGTAATCAACTTTCTGGTGCACTTCCATCGGAGATAATCTCATGGCAATCACTGGATACTTTAACAGTCTCAAGAAACAATATTTCTGGCCAAATCGCAGTAGCTATGGCTGCTCTTCCTAACCTGGTTTACTTGGACTTATCTGAAAATGACATATCTGGTGAAATCCCACCCCAGCTTGCCAATTTGAGGTTTATTTTTCTCAACTTGTCCTCCAACAATCTTTCTGGGAACATCCCTGATGAATTTAATAACCTCGCATATGAAAATAGTTTCTTGACCAATCCTCATCTGTGTGCTTACAATAAAATACTCAACCTTTCTAGCTGCTTGGCCAAAACACCACCACCACACACCAGCAATTCGTCTTCGAAGTTCCTTGCCCTGATTCTTGCTGTCACCTTCATTGTTTTGTTGTTGGCTCCTGCCTCGTTGGTCTTCTACACGTTGAGAAAGCAGAGAGGCAAAAATCACAGGGGCCGTAAGCTTTCAACATGGAGGCTTACCTCATTCCATAGGCTTGATCTCACTGAAATTAATCTCTTCTCAAGTTTAACAGATAATAACCTTATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCGGGTGAGTATGTTGCAGTGAAAAAGATTAGGGATTGCAAAAATCTGAATGACAAGGTGGAGAAAGAATTTATGGCTGAGGTTGAAATCCTGGGCAATATTCGGCATTCCAATATAGTGAAGCTTTTGTGTTGTTATTCAAGTGAGAACTCCAAACTTCTTGTTTATGAACACATGGTAAACCAGAGCCTGGACAAATGGCTTCATCGAAAGAAGAGAACATCAGCTACAGGGTTGAGTTCACCCAACAAGAATCACGTGGTGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATTGGGGCTGCACAAGGCCTCTGTTACATGCACCATGATTGCTCACCTCCAATCATCCACCGAGATATCAAATCTAGCAATATACTGCTGGACTCTGAGTTCAAGGCTTGTATAGCAGATTTTGGACTTGCCAAGATGTTGGCAAAGCCTGGGGAGTCACACACCATGTCTGCTCTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTATTCAACCAAGATTAACGAGAAAGTTGATGTATATAGCTTTGGAGTTGTACTCCTAGAGCTAGTGACGGGAAGAGAGCCTAATAGTGGGGGCGAGCATGCCTGCAGCTTAGTTGATTGGGCATGGCAACATTATAGCGAAGGGAAGTGCCTTAGTGATGCTTTCGATGAGGATATCAAAGAAACAAGTCATGAGGAAGAGATGACTTGCGTCTTCAAATTAGGTCTCATTTGCACAAGCACATTACCCTCAACCAGGCCTTCCGCGAAGGAGATTTTGCATGTTTTTCATCAATGTTGTCTTCCAGGTTCTGCTCGTAAAAGAGTGGCAACTGAGTTTGATGTCACTCCTCTTCTTGGCAATACAACGTACATTTCCAATTACAAGGATAGTAATGCTGTAAGCGAAAGTGGAGAAAGCAGCTTTTATAGGGTGTAA | 3102 | 0.4458 | MSKIPLFSLKFPLHLFLLLSVALPSQVISQTTTTEETILLTLKRQLGDPTSLRSWKPSSSSPCDWTEIRCTGGSVTELLLPSKSITTQKLPAKICDLKNLTMLDLSNNSIAGEFPTFLYNCTNLRYLDLSQNYFAGPIPADIDNLKTLTFLNLGGNSFSGDVPPEIGRLRDLQTLHLYQNNFNGTFPKEIGDLSNLEILGLAYNYRLVPMAVPFEFGNLRNLRFMWLKQCNLIGKIPESFGNLANLEQLDLSLNNLTGSIPSSLFSLRNLKFLYLFRNRLSGVLPSSVKALNLTLIDLAMNNLTGPIPQEFGKLQNLTILHVYSNQLSGQIPSNLGLIPSLENFRVFDNKLNGTLPPKLGLYSKLVAFEVSDNQLIGGLPEHLCAGGALLGVIAFNNNFSGDLPPWLGNCVSLTTVQLFGNKFSGEVPLGLWTLRKLSTLMLSDNSFSGQLPDKLSWNMSRLEIRNNNFSGKISLGISSAKNLVVFDARNNKLSGEIQRELTGLSRLTTLMLDGNQLSGALPSEIISWQSLDTLTVSRNNISGQIAVAMAALPNLVYLDLSENDISGEIPPQLANLRFIFLNLSSNNLSGNIPDEFNNLAYENSFLTNPHLCAYNKILNLSSCLAKTPPPHTSNSSSKFLALILAVTFIVLLLAPASLVFYTLRKQRGKNHRGRKLSTWRLTSFHRLDLTEINLFSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIRDCKNLNDKVEKEFMAEVEILGNIRHSNIVKLLCCYSSENSKLLVYEHMVNQSLDKWLHRKKRTSATGLSSPNKNHVVLSWPTRLKIAIGAAQGLCYMHHDCSPPIIHRDIKSSNILLDSEFKACIADFGLAKMLAKPGESHTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGREPNSGGEHACSLVDWAWQHYSEGKCLSDAFDEDIKETSHEEEMTCVFKLGLICTSTLPSTRPSAKEILHVFHQCCLPGSARKRVATEFDVTPLLGNTTYISNYKDSNAVSESGESSFYRV* | 1034 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g01608 | 1033 | ProSiteProfiles | Protein kinase domain profile. | 698 | 985 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 314 | 338 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 552 | 576 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 243 | 267 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 97 | 121 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 504 | 528 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 169 | 193 | IPR003591 | - | |
Rops10g01608 | 1033 | SMART | LRR_typ_2 | 434 | 458 | IPR003591 | - | |
Rops10g01608 | 1033 | Pfam | Leucine rich repeat N-terminal domain | 36 | 70 | IPR013210 | - | |
Rops10g01608 | 1033 | FunFam | Receptor-like protein kinase HSL1 isoform A | 32 | 184 | - | - | |
Rops10g01608 | 1033 | ProSitePatterns | Protein kinases ATP-binding region signature. | 704 | 728 | IPR017441 | GO:0005524 | |
Rops10g01608 | 1033 | Gene3D | Transferase(Phosphotransferase) domain 1 | 778 | 996 | - | - | |
Rops10g01608 | 1033 | Pfam | Leucine rich repeat | 231 | 280 | IPR001611 | GO:0005515 | |
Rops10g01608 | 1033 | Pfam | Leucine rich repeat | 99 | 157 | IPR001611 | GO:0005515 | |
Rops10g01608 | 1033 | SUPERFAMILY | L domain-like | 38 | 380 | - | - | |
Rops10g01608 | 1033 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 213 | 979 | - | - | |
Rops10g01608 | 1033 | SUPERFAMILY | RNI-like | 292 | 600 | - | - | |
Rops10g01608 | 1033 | PRINTS | Leucine-rich repeat signature | 100 | 113 | - | - | |
Rops10g01608 | 1033 | PRINTS | Leucine-rich repeat signature | 243 | 256 | - | - | |
Rops10g01608 | 1033 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 311 | 625 | - | - | |
Rops10g01608 | 1033 | ProSiteProfiles | Leucine-rich repeat profile. | 554 | 577 | IPR001611 | GO:0005515 | |
Rops10g01608 | 1033 | Gene3D | Ribonuclease Inhibitor | 185 | 290 | IPR032675 | - | |
Rops10g01608 | 1033 | Gene3D | Ribonuclease Inhibitor | 459 | 645 | IPR032675 | - | |
Rops10g01608 | 1033 | SUPERFAMILY | Protein kinase-like (PK-like) | 691 | 983 | IPR011009 | - | |
Rops10g01608 | 1033 | ProSiteProfiles | Leucine-rich repeat profile. | 245 | 267 | IPR001611 | GO:0005515 | |
Rops10g01608 | 1033 | SMART | serkin_6 | 698 | 985 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g01608 | 1033 | Pfam | Protein kinase domain | 700 | 982 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g01608 | 1033 | Gene3D | Ribonuclease Inhibitor | 291 | 384 | IPR032675 | - | |
Rops10g01608 | 1033 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 835 | 847 | IPR008271 | GO:0004672|GO:0006468 | |
Rops10g01608 | 1033 | FunFam | Receptor-like protein kinase HSL1 | 678 | 777 | - | - | |
Rops10g01608 | 1033 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 187 | 284 | - | - | |
Rops10g01608 | 1033 | FunFam | Kinase family with leucine-rich repeat domain-containing protein | 778 | 1000 | - | - | |
Rops10g01608 | 1033 | Gene3D | Phosphorylase Kinase; domain 1 | 681 | 777 | - | - | |
Rops10g01608 | 1033 | Gene3D | Ribonuclease Inhibitor | 32 | 184 | IPR032675 | - | |
Rops10g01608 | 1033 | Gene3D | Ribonuclease Inhibitor | 385 | 458 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g01608 | Rops-Chr10 | 29663219 | 29666705 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g01608 | 21 | 1007 | Receptor kinase-like Gene Family | AT5G25930 | 53.939 | 0.0 | 1033 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops10g01608 | Pkinase | 5.3e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g01608 | - | K00924 | adu:107461025 | 1444.87 |