Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01575 ATGGTGGCAACAGTCAGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGATTCCTTGGAAAGGGCTCAGATGGTGAAGTATGTTGTATTTGATAAAACAGGAACTTTAACTCAGGGGAAAGCCACTGTTACTGTTGCCAAGGTGTTCACAAGAATGAACCGTGGAGAATTTCTTACATTGGTGGCTTCTGCGGAGGCTAGCAGTGAACACCCACTGGCGAAAGCGATATTACAATATGCACGTCATTTTCATTTCTTTGATGAGTCCTCTCCAACCAGTGGCACCCAGAATGATTCCAAGGAGTTAAGGTCAGGGTGGCTTTATGATGTCGCAGACTTCTCTGCCATTCGGGGAAAGGGTGTGCAGTGCTTAATAGATGGGAAGCGTATCTTGGTAATGTCTTTTGGCCATTGCCGCCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCCGTGA 456 0.4671 MVATVRANNGVLIKGGDSLERAQMVKYVVFDKTGTLTQGKATVTVAKVFTRMNRGEFLTLVASAEASSEHPLAKAILQYARHFHFFDESSPTSGTQNDSKELRSGWLYDVADFSAIRGKGVQCLIDGKRILVMSFGHCRHGLLVHAWLSHP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01575 151 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 132 - -
Rops10g01575 151 ProSitePatterns E1-E2 ATPases phosphorylation site. 31 37 IPR018303 -
Rops10g01575 151 Gene3D - 34 142 IPR023299 GO:0000166
Rops10g01575 151 Pfam haloacid dehalogenase-like hydrolase 25 104 - -
Rops10g01575 151 FunFam Copper-transporting ATPase RAN1 36 128 - -
Rops10g01575 151 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 31 136 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01575 Rops-Chr10 29197735 29198248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01575 1 132 Primary Pumps ATPases AT5G44790 73.134 5.09e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01575 K17686 - gmx:100778219 219.164