Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01563 ATGAAAACCCATCAACCAAAGCTCAAAACTCAGCTATTTTCTTGTGGCTTCTTTCGTCACTGTGCTCAAAGTGTGGTGAGTCCCACAGCCACCACCCCACCACTCCCTCTCACTTCTCACACCCCAACAACATCAACCATAGCTCCTCCTCCATTCAAACGTGAATCCTCAACCTCTTCCTCTTCTTCCACTACTTCTCAAAGCTTCACACAGTGGAAGTTCTCTCTCCCTAACACCAAAACAATAGACAAAGAAACTGACACTGTTGAGACTGAAACTGAAACTCACACTTCCCCTTCTTTCACCACCATTCCAAACCTCCAAGAACTGTTCCACGTGTCAGAACTCCAACTCAGCACTGATCTTAATGCTGCACTTCACCTTCTAGAACGTTCCCTTGTTCCCAACCCGCCACAAGAACAACCACCATGTCCCCCTAACCTCATGCGTGCCCTTATTAACAATCTCAGGGAAGCCAAGTCAGCAACTAAGATACTTTTTGCTCTTTGCTTGTCGGAGGCTAACCGCCTCGTCGCCGTCGAGGCCGGTGCCGTCGGCGCCGTAGTGGAGTCTGCACCGGAGCTAGATGGTTCTCCGGCGGAGAGGGCTTTGGCGGCGCTGGAGCTCATGTGCACGGTGGCGGAGGGGGCGGAGGAAGTGAGGGCACACGCGCTCGCCGTGCCGGTGATGGTGACGATGATGGGCAAGACCGGGGCGCGTGGGAAGGAGTATGCTATCGGGGTGCTGGCGGTTATTTACGGTGGTGCTGTGGCGGAGCAGGTGCCGGCTCCGCCTGAAGAGGTGGCGCGTGCGGTGGAGTTGGCACTGCAAGGAGAGTGTAGTGTCAGGGGAAGAAGGAAAGGTGGGCAGTTGTTGAAGACACTGCAACAACTCTCTCATCCTCCTCACCCTTACCAAGCAAATTGA 927 0.5415 MKTHQPKLKTQLFSCGFFRHCAQSVVSPTATTPPLPLTSHTPTTSTIAPPPFKRESSTSSSSSTTSQSFTQWKFSLPNTKTIDKETDTVETETETHTSPSFTTIPNLQELFHVSELQLSTDLNAALHLLERSLVPNPPQEQPPCPPNLMRALINNLREAKSATKILFALCLSEANRLVAVEAGAVGAVVESAPELDGSPAERALAALELMCTVAEGAEEVRAHALAVPVMVTMMGKTGARGKEYAIGVLAVIYGGAVAEQVPAPPEEVARAVELALQGECSVRGRRKGGQLLKTLQQLSHPPHPYQAN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01563 308 MobiDBLite consensus disorder prediction 28 65 - -
Rops10g01563 308 SUPERFAMILY ARM repeat 122 253 IPR016024 -
Rops10g01563 308 MobiDBLite consensus disorder prediction 81 101 - -
Rops10g01563 308 Gene3D - 103 264 IPR011989 -
Rops10g01563 308 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01563 147 297 U-box Gene Family AT1G49780 33.553 9.39e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01563 - - gmx:100814020 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01563 10 29027575 29028713 Rops10g01563 10 29027575 29028713 ECH