Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01513 ATGCTCTTCATGTTGGCCACTTGTTTTATGCCATCGCTGAGTGACACAAACACTCAAGTTCTGATGAACTTCAAAAGCTTCTTGTCCAATGCTGATGCTTTAAAGAACTGGAATGAGTCTACAAATGTTTGCGGCTGGACTGGTATATTATGCTTCAATCAGACATTTCATGGTTTGAGGCTAGAGAATATGGGACTAAGTGGGGTGATTAACCTAGACATCCTGCTAGGATTGTCCAATCTGAACAGTTTTAGTATTATTAACAATAACTTTGAGGGTCCAATGCCTGCTTTCAAGAAGCTTGTGAGTTTAAGGGCATTGTTTTTGACCAATAACAAGTTCTCTGGTGAAATTCCTGATGAGGCTTTTGAAGGCATGAGACGGTTGAAGAGAGTATTCTTGGCAGAAAATGGGTTCAGGGGTCATATTCCTACATCCCTTGCTAAATTGCCTAGACTTTTGGATGTTGACTTACATGGAAATAGTTTTGAAGGTAACATACCAGAATTTCAACAGAGAGATTTCAGAGTTTTTAATTTATCTAACAACCAATTGGAGGGTCCAATACCTGAAAGCTTAAGCAACGAGGATCCAAGCTCATATGCAGGAAACAAAGGTCTATGTGGAAAACCTCTAAGCCACCCCTGCAGTAGTAGCAGCCCTCCCTCTTCTTCTGATCACCGTCCACCCTTAATTGTTCCACGTCAAGAAAATGAACATAAGAAACACAGCGTCCTTATCACTGTTATTGTAGTGGTGGTTGTGCTTGCCTTGGCTTCAATACTAGCACTCATGTTCATCCGTTACCGTCGAAAGCAAATTGCACAACCCGAGTTGGACAAAGATACACAATCCCATAACACTACCAGTGCTGCAGTTTCCATCGAGGCCAAATCCATTAATGCGGTAGCAGTTGAATCCAAGAAGAGTGAAGATGGAGATTTGAACTTTGTTAGGAACGAGAAGGGGGTGTTCGATTTGCAAGACTTGCTTCGTGCCTCAGCTGAGGTTCTAGGCAGTGACAGTTTTGGTTCCACGTACAAGGCCATGGTTTTGAATGGACCAGTTGTGGTGGTGAAGAAATTTAAGCACATGAACAATGTTGGGAAAAAAGATTTTTTTGAACACATGAAAAGACTTGGAAGGTTGTCACATCCCAACCTGCTCCCTCTTGTTGCATTTTATTATGGAAAAGAAGATAAGCTTTTGGTTCATGACTTTGCTGAAAATGGTAGCTTGGCTAGTCATCTTCATGGTAGAGGTGGTTCTGAGTTGGATTGGCCAACACGTTTGAAGATTATAAAGGGAGTAGCCAGCGGGTTAGCTTATCTTTACCGAGAGTTCCCTGATCAAAACGCACCACATGGCCACCTTAAATCCTCAAATGTTGTGTTGGACCATTCATTTGAGCCTCGTTTGACAGAGTATGGACTTGGGGCAGTGATAGAGAAGAGGCATGCACAGCAGTTCATGGCAGCATACAAGTCCCCAGAGGTGAAGCAACATGAGAGGCCAAGTGAGAAGAGTGATGTTTGGTGCTTGGGGATCCTGATACTGGAGGTTCTGACAGGGAAGTTTCCAGCTGATTATTTGAGACATGGGAAGGGTGCAAGTGAGGATTTGGCAAAGTGGGTGGAGACAATAGTGAGGGAAGGGTTGGATAAAGGGAGAAGGAATGGGGAGGGTGAGATGGTGAAGCTGTTGAGGATTGGAATGGGTTGTTGTGAATGGGATTTGGAGAGTAGGTGGGGTTGGAAGGAGGCAGTGGCTAAGATTGAGGAGTTGAAGGAGAGGGATGTTGGAGATGATCATTTGTACTCATCTACTATGAGTCTGGATGACTCATCTCTCTCACTCACTGCTTGA 1866 0.4368 MLFMLATCFMPSLSDTNTQVLMNFKSFLSNADALKNWNESTNVCGWTGILCFNQTFHGLRLENMGLSGVINLDILLGLSNLNSFSIINNNFEGPMPAFKKLVSLRALFLTNNKFSGEIPDEAFEGMRRLKRVFLAENGFRGHIPTSLAKLPRLLDVDLHGNSFEGNIPEFQQRDFRVFNLSNNQLEGPIPESLSNEDPSSYAGNKGLCGKPLSHPCSSSSPPSSSDHRPPLIVPRQENEHKKHSVLITVIVVVVVLALASILALMFIRYRRKQIAQPELDKDTQSHNTTSAAVSIEAKSINAVAVESKKSEDGDLNFVRNEKGVFDLQDLLRASAEVLGSDSFGSTYKAMVLNGPVVVVKKFKHMNNVGKKDFFEHMKRLGRLSHPNLLPLVAFYYGKEDKLLVHDFAENGSLASHLHGRGGSELDWPTRLKIIKGVASGLAYLYREFPDQNAPHGHLKSSNVVLDHSFEPRLTEYGLGAVIEKRHAQQFMAAYKSPEVKQHERPSEKSDVWCLGILILEVLTGKFPADYLRHGKGASEDLAKWVETIVREGLDKGRRNGEGEMVKLLRIGMGCCEWDLESRWGWKEAVAKIEELKERDVGDDHLYSSTMSLDDSSLSLTA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01513 621 SUPERFAMILY L domain-like 37 195 - -
Rops10g01513 621 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 71 167 - -
Rops10g01513 621 Pfam Protein kinase domain 336 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01513 621 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 598 IPR046959 -
Rops10g01513 621 SUPERFAMILY Protein kinase-like (PK-like) 336 595 IPR011009 -
Rops10g01513 621 Gene3D Transferase(Phosphotransferase) domain 1 408 610 - -
Rops10g01513 621 MobiDBLite consensus disorder prediction 212 232 - -
Rops10g01513 621 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Rops10g01513 621 Gene3D Ribonuclease Inhibitor 14 173 IPR032675 -
Rops10g01513 621 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01513 621 MobiDBLite consensus disorder prediction 188 207 - -
Rops10g01513 621 Pfam Leucine rich repeat N-terminal domain 17 51 IPR013210 -
Rops10g01513 621 Gene3D Ribonuclease Inhibitor 174 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01513 Rops-Chr10 28450558 28452963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01513 11 614 Receptor kinase-like Gene Family AT5G35390 46.457 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops10g01513 Pkinase 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01513 - - gmx:100803999 890.182