Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01511 ATGTGGTTACCAAAGAATCATGCAGAGAAGAAGGATGGTATGAATGGATTAATAGCAGTGGCAATAGACAAAGAAAAGGGAAGCCAAAATGCACTCAAATGGGCTGTTGACAATCTCCTCACAAGAAGTGCAACTGTAATTCTCGTCCATGTCAAGCTTGTATCAAATTCTCTTACTTCATCATCACCTTCTCTTTTCACCTCAAGGACAGGGATAAATGCTTATGAGAGTTCACAGGTGATATGTAGAGAACCCGATGCCCAAAACAGACATGTTTTCCTCCCATATCGTGTCTTCTGTACACGGAAAGATATACAATGCAAGGACGTGCTACTAGAAGATGTAGATGTATCCAAAGCTATAATTGAATATGCTTCTCTGGCAGGAATTGAGCATCTGGTTCTTGGCTCTTCAACAAAAACTGGTTTGCTCAAAAGATTCAAGGTATCAGATATTCCAGGAACAGTATCAAAAGGGGCACCGGATTTCTGTACGGTTTATGTTATTTCTAAAGGAAAGATTCATTCAATGCGATCAGCTTCTCGTCCTGCTCCAACCGTTCCCCCTCTCCACACCTATCAAGCTAGTATCAAGTCAGAGCAATCAGACCCAAATATGTTGTTGGCTCAAAATGTAAAAGAAGAAGAAAGGAAGTCCATTGATGCATCACTGCGTAGATCGCTGGATGGAACAGAAACATTCAGGTCACCATTCACTAGGAAAGGTTACAATGGCAGATCATATGGGGAAATTTCCAAGCCAGATACTGACATATCCTTTGTAAGTTCTGGAAGGTCAAGTACAGACCGGATGTTTCCTTCACTATACAGCAACCCAGATGCAGGAATGTCCACCCCTCGGCTATCAAGTAGTTCAGACACAGATAAAAGCTACAGCTTTGAGTCAATGCATTATGGAAGGAGGTCTGTGGAAATGAGCGTTCCTCCTGAATTTACATCACTCTCATTTGATAGTGATAGGCAATCAAGTTCTACATCACAAGCAGTGGATGATATGGAGGCTGAAATGAAGAGATTGAAGTTAGAGCTCAAGCAAACAATGGAAATGTATAACACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCAGTAGAACTTCAGCGGTGGAAATTAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTGGCTGAGGAAGCTGCATTGGCGATTGCCGAAAAGGAGAAAGCCAAATCTAAAGCAGCCCTTGAGGCTGCTGAAGCACAAAAAAGGATTGCAGAACTGGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAATCAGAAGAGAAAAGAAAAGTACTTGATGCTTTGGTAAATGTAGATGTCAGATATAGAAGGTATTCAATCGAGGAGATTGAAGCTGCAACAGAATTCTTTTCGGAGTCCCTTAAGATTGGAGAAGGAGGATATGGTCCTGTTTTTAAGTGCCTTCTGGACCATACATCTGTTGCAGTGAAGGTTTTACGTCCCGATGCAGCACAAGGAAGGTCACAGTTTCAACGAGAGGTTGAGGTACTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCAGAATATGGCTGTCTTGTATATGAGTACATGGCTAATGAAAGCTTGGATGACCGACTCTTTTGTAAAGGCAACACTCCCCCACTTTCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATAGGCACCGGCTTGCTGTTCCTTCACCAGACAAAACCAGAACCTCTGGTGCATAGGGACTTGAAACCAGCCAACATATTGCTTGACAGAAACTATGTGGCAAAGATCAGTGATGTAGGTTTAGCAAGGTTAGTCCCACCAGCTGTGGCTGACAGTGTTACACAATATCGCATGACATCAGCTGCAGGAACTTTCTGCTATATAGATCCTGAGTACCAGCAGACAGGAATGCTTGGTGTCAAATCAGACATATACTCTCTTGGGATCATTTTCCTTCAAATCTTGACAGCAAGATCACCAATGGGTTTGGCTCACCATGCTGCAAGAGCCATTGAGAAGGGAACTTTTTCGGAGATGCTGGACCCTACAGTGCCTGATTGGCCACTAGAGGAGGCCTTGAACTTAGCAAATCTAGCAGTCAAGTGTGCTGAATTAAGACGGAGAGATAGACCTGATCTTGGCAACATTGTGTTACCTGAGCTCAATAGGCTAAGAGAACTTGCTGAAAAAAGTGATCTACATTGTAACTCTATAAATGTGTCCCATGAAAGACAAGTTTCTTTGCAGCTGGATGGAGGTTGTCCTCCATGTCCTCACTCTGGAGAGATTAGAATTTAG 2334 0.4327 MWLPKNHAEKKDGMNGLIAVAIDKEKGSQNALKWAVDNLLTRSATVILVHVKLVSNSLTSSSPSLFTSRTGINAYESSQVICREPDAQNRHVFLPYRVFCTRKDIQCKDVLLEDVDVSKAIIEYASLAGIEHLVLGSSTKTGLLKRFKVSDIPGTVSKGAPDFCTVYVISKGKIHSMRSASRPAPTVPPLHTYQASIKSEQSDPNMLLAQNVKEEERKSIDASLRRSLDGTETFRSPFTRKGYNGRSYGEISKPDTDISFVSSGRSSTDRMFPSLYSNPDAGMSTPRLSSSSDTDKSYSFESMHYGRRSVEMSVPPEFTSLSFDSDRQSSSTSQAVDDMEAEMKRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLNAEMKALKESEEKRKVLDALVNVDVRYRRYSIEEIEAATEFFSESLKIGEGGYGPVFKCLLDHTSVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANESLDDRLFCKGNTPPLSWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPAVADSVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARSPMGLAHHAARAIEKGTFSEMLDPTVPDWPLEEALNLANLAVKCAELRRRDRPDLGNIVLPELNRLRELAEKSDLHCNSINVSHERQVSLQLDGGCPPCPHSGEIRI* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01511 777 MobiDBLite consensus disorder prediction 260 297 - -
Rops10g01511 777 CDD STK_N 17 172 - -
Rops10g01511 777 Gene3D HUPs 17 170 IPR014729 -
Rops10g01511 777 PANTHER OS02G0152300 PROTEIN 18 751 - -
Rops10g01511 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Rops10g01511 777 ProSiteProfiles Protein kinase domain profile. 470 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01511 777 Coils Coil 329 442 - -
Rops10g01511 777 Gene3D Phosphorylase Kinase; domain 1 449 542 - -
Rops10g01511 777 SMART serkin_6 470 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01511 777 Gene3D Transferase(Phosphotransferase) domain 1 543 757 - -
Rops10g01511 777 Pfam Protein kinase domain 472 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01511 777 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 442 542 - -
Rops10g01511 777 SUPERFAMILY Protein kinase-like (PK-like) 453 729 IPR011009 -
Rops10g01511 777 Pfam Universal stress protein family 17 147 IPR006016 -
Rops10g01511 777 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 147 - -
Rops10g01511 777 FunFam U-box domain-containing protein 51 543 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01511 Rops-Chr10 28431683 28436574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01511 1 743 Receptor kinase-like Gene Family AT1G78940 57.520 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops10g01511 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01511 - - gmx:100803867 1095.11