Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01461 ATGGCATCACAGAACCCTCCTCCTCCTCCTATTCCAATCTCAGACCTTGAAGCTGTCCAAAACGTTCCCTCTAACATGAGTGCCTCCCCTTTATCTGCAGTACAGAAAGTGAAAAGCAACTTAGTTTTGCATTCAAAATGGGCTGAACTTAATGGAGCCATGGGAGACCTTGGCACATACATACCCATAGTACTTGCACTCACCTTAGCCAGAGACCTTAACCTTGGCACCACATTGATTTTCACTGGCATGTATAACATCCTCACTGGTGCCATTTATGGGGTCCCCATGCCAGTCCAGCCCATGAAGTCCATAGCCGCCGTGGCCCTCTCCGACCCCGGATTCGGTGTTCCGGAGATCATGACCTCCGGCATCTTGACCGGAGCGGTGTTGTTGGTGTTGGGTGTCACAGGGTTGATGCAGCTTGTGTACAAGCTCATTCCTTTATGTGTTGTAAGAGGGATTCAGCTTGCACAGGGTTTGTCCTTTGCCTTAACTGCTGTTAAATATGTAAGGAAAGTGCAAGATCTACCAAAGTCTAAATCTTTGGGTGATAGGCATTGGTTTGGGTTTGATGGGTTGGTTTTGGCTATTGTGTGTGTTTGCTTTATTGTTGTTGTGAATGGTGCTGGTGATGACCATGATGATGCTCAAGAAAGAAGAAGCTATGATCTGGGTGGCACAGGAAGGGTTGAAGGTGAAGAAAGAGAAAGGAGAGGTAGAGTGAGAAAGATTGTTTTTTCACTTCCTTCTGCTTTCTTAGTTTTTGTGTTGGGTGTGATTTTAGCCTTTGTAAGGAGGCCTGGGGTGGTACATGAAATCAAATTTGGACCCTCTTCTATAGAGGTAGTGAAAATGTCTAGCCATGCATGGAAACAAGGTTTTATCAAGGGGACAATTCCTCAACTTCCATTGTCAATTTTGAACTCAGTGATAGCTGTTTGCAAGCTGTCATCTGATCTATTTCCAGGTAAAGATTTTTCAGTCACATCCCTTTCAGTGACAGTGGGGTTGATGAACCTTGTTGGTGGGTGGTTTGGTGCCATGCCAAGTTGTCATGGTGCTGGTGGACTAGCAGGACAGTATAAGTTTGGTGGGAGGAGTGGAGGGTGTGTGGCACTGCTCGGTGCTGCTAAATTGGTGTTGGGTTTTGTGTTAGGAAGTTCTTTGGCTCATTTTTTTAACCAGTTTCCAGTGGGAATCTTGGGGGTGCTGCTTTTGTTTGCTGGGATTGAGCTAGCCATGGCTTGTAGGGACATGAATACCAAAGAGGATTCCTATGTGATGCTTATTTGTACTGCAGTTTCGTTGGTGGGATCAAGTGCTGCTCTTGGCTTCTTGTGGGGAATGATTATTTTTGGGCTTCTTAAGCTGAGAAATTGGACATACAATAAACCACTTTCTAGTATTTGGAAGCATAAAAGCCCCGAGCAAGTTTGA 1440 0.4535 MASQNPPPPPIPISDLEAVQNVPSNMSASPLSAVQKVKSNLVLHSKWAELNGAMGDLGTYIPIVLALTLARDLNLGTTLIFTGMYNILTGAIYGVPMPVQPMKSIAAVALSDPGFGVPEIMTSGILTGAVLLVLGVTGLMQLVYKLIPLCVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGDRHWFGFDGLVLAIVCVCFIVVVNGAGDDHDDAQERRSYDLGGTGRVEGEERERRGRVRKIVFSLPSAFLVFVLGVILAFVRRPGVVHEIKFGPSSIEVVKMSSHAWKQGFIKGTIPQLPLSILNSVIAVCKLSSDLFPGKDFSVTSLSVTVGLMNLVGGWFGAMPSCHGAGGLAGQYKFGGRSGGCVALLGAAKLVLGFVLGSSLAHFFNQFPVGILGVLLLFAGIELAMACRDMNTKEDSYVMLICTAVSLVGSSAALGFLWGMIIFGLLKLRNWTYNKPLSSIWKHKSPEQV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01461 479 PANTHER - 27 467 IPR031563 GO:0015098|GO:0015689
Rops10g01461 479 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098|GO:0015689
Rops10g01461 479 Pfam Molybdate transporter of MFS superfamily 295 413 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01461 Rops-Chr10 27887223 27888662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01461 35 468 Inorganic Solute Cotransporters AT2G25680 65.826 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01461 - - gmx:100793562 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01461 10 27887223 27888662 Rops10g01461 10 27887223 27888662 ECH
Rops9g01849 9 33342108 33343565 Rops10g01461 10 27887223 27888662 PCT