Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01437 ATGGAAGAAATTGAAGGGGTGAATGAAAGTAGAAGCTCAAGTGAGAGTCGACCTCCCAATCCAAACTCACTTGCTGCTGCATATCGCCAATGTCAACGCAATGATCCTCTCGTGCTACCTTGCAAGAAATCCCTTGTTCGCCACATGAAAATGAAGTTGTCTGATGTATCTGCTGAGCCAGGACATGTTGCTGAAGATTGTCAGTCTGATTTCCTTCCAGAGCTTCGTTCTGGAGCATGCGCAGATATTGGGTTCCGGTCAAGTATGGAAGATGTATATGTTTGTGTGGACAACTTTAGGCAGGATTCTGGGCTCAAGAATCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGAATTTGCTTGCCATCATTTGCCAAAGTTCATTCTGAAGGATGAAGATTTCCCAGGAGATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGAATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTACTATTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATCGAAATGTCAAGAGATCATAAACCAATTTGCATCAAAGAGAAGAACCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTCAATGGACAACTTAATGTTGCTCGTGCTCTTGGTGACTGGCACATGGAAGGAATGAAAGGCAAAGATGGTGGACCACTCAGTGCAGAACCTGAACTTATGACTACAAAACTTACTGCAGAGGATGAATTTCTCATCATAGGTTGTGATGGGATCTGGGATGTATTTAGGAGCCAAAATGCAGTGGATTTTGCCCGGCGCAGGCTTCAGGAGCATAATGACCCTGCCATGTGCAGTAAGGATCTGATTGATGAGGCATTAAAGAGAAAGAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTTCAGCAGCAGCCTCCACCTAACTTGGTGGCACCACGTTCTAGAGTGCACAGGAGCATCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCTTGGATGATGATGGGAAGGCACGTTCTTCTAAGGGAAAAGACGATTCTACTGATTACTGA 1176 0.4566 MEEIEGVNESRSSSESRPPNPNSLAAAYRQCQRNDPLVLPCKKSLVRHMKMKLSDVSAEPGHVAEDCQSDFLPELRSGACADIGFRSSMEDVYVCVDNFRQDSGLKNHIDGPSAFYGVFDGHGGKHAAEFACHHLPKFILKDEDFPGDIERIVASAFLQTDNAFAEACSLNAALASGTTALATIVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICIKEKNRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLIDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVHRSISAEGLKELQSFLDSLDDDGKARSSKGKDDSTDY* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01437 391 FunFam Probable protein phosphatase 2C 22 61 342 - -
Rops10g01437 391 SMART PP2C_4 66 337 IPR001932 -
Rops10g01437 391 Pfam Protein phosphatase 2C 78 331 IPR001932 -
Rops10g01437 391 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Rops10g01437 391 PANTHER PROTEIN PHOSPHATASE 2C 47 337 IPR015655 GO:0004722|GO:0006470
Rops10g01437 391 Gene3D - 57 343 IPR036457 -
Rops10g01437 391 ProSiteProfiles PPM-type phosphatase domain profile. 76 339 IPR001932 -
Rops10g01437 391 CDD PP2Cc 76 339 IPR001932 -
Rops10g01437 391 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g01437 391 SUPERFAMILY PP2C-like 71 341 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01437 Rops-Chr10 27502806 27506309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01437 1 373 PP2C-type Phosphatase Gene Family AT2G25620 67.436 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01437 K14803 - gmx:100815725 640.958