Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01430 ATGCATTGCCCCTCTCTCTCTCTCTCCCCCACCCCTCCTAAGACCCACCGCGCTCTAGAGAGAGAAAGGTCCCCACCCTCCTCTGTGATCTTCATTCTCCGGGGACCCTTCAGCTCCATTCCACCATTCTTCTCTCACATCACATCCTCAGGTCAGGGTCCACCTCCCTCTCTTCCATTCATTCAAATCATTGCATTTCTATTAAATCTTCAAAAATTTCCTCCATCAACCATGGGATCCATTGGAATGCCATTTGAGGGAATAATTCAAGATATCAAAGGAAGAGTCGAATGCTATAAACAAGATTGGTTTAGTGCGATCTGTTCTGGCGCTGGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTCCCTGTTATTGCTTTTGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGCACAGTGGAATCATTGACTTCTACTGCCATTTGTGGAATTATCCATTCAATATTTGGTGGCCAGCCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTGTATAGTTTCTGCAAAAAAACGCCAGAACTGGGTGCCGAGCTCTTTCTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACAGCATTCATGTTAATTCTGCTTGCAATTTTTAACGCTTGCAACATTATCTCTAGGTTTACAAGAATTGCAGAGGAGTTATTTGGCATGCTAATTACTGTTCTTTTCTTTCAAGAGGCAATAAAGGGAGTGATGGAAGAGTTCCACAAACCCAAGACAAAAGATCCTTTATCAGAGCAATTCAAACTCCCTTGGCGGTATGCAAATGGATTACTTGCAATCATTTTCTCCTTTGGACTACTATTAACTGCCCTTAAAACCAGAAGAGCAAGAACATGGCGGTATGGAACAGGGTGGCTACGAGGTTTTATTGCAGATTATGGGGTTCCCATGATGGTAGTGCTATGGACTGCACTATCTTATACTGTACCACGTGGAGTTCCAGATGGTGTTCCTAGAAGGCTGATTTGTCCGCTTCCATGGGAACCTGCGTCTCTCTATCACTGGACAGTAGTGAAGGATATGGGAAAGGTACCCTCTGTATATATACTTGGGGCAATTATTCCAGCTGTTATGATAGCAGGTTTATACTTTTTCGATCACAGCGTAGCTTCCAAGATGGCGCAACAGAAAGATTTTAACCTTTCAAAGCCATCTGCCTACCACTACGATCTTTTCCTGCTTGGAATAATGACTCTGCTTTGTGGTATCTTTGGCCTTCCTCCTTCCAATGGAGTCCTTCCACAATCCCCTATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGTTGATCCGAAAAAGGGTGATGAAAAGTGCTAAGGAATGCATTAGGCTACAAAGGACGAACTCTGAATTAATCGGAAAGATGCAAGCTGTGTTTGTAGAAACGGATACAGCCCCAACTGATAAAGAAATGGAGACTTTGAAGAAAGCTGTAATGAAATCTGATACCAGGGATGGCACAAAGGAAAACTTTGATCCTGTGAAAAACATTGAAGAATATCTACCAGTCAGGGTTAATGAGCAAAGAATGTCCAACTTATTGCAGTCCCTACTGATTGGTGTATCAATTTTTGCCATGTCTATTATCAAAAGGATACCTACCTCAGTTCTTTGGGGATATTTTGCTTACATGGCAATTGTTAGTCTCCCAGGGAATCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCACCCCAGGCCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGAAAGTACCATTCAAGACCATAGCTGCATTTACAGGCTTACAGATAGCATATTTTCTGTTCTGTTTTGGGGTGACATGGATACCTGTAGGTGGAATATTGTTTCCCCTACCATTCTTCTTTCTCATACCTATAAGAGAAAACTTGCTTCCTAAGCTATTCAGGCCTAGTCATCTTCAGGAACTAGATGCTTCTGAGTACGAGGAAATTGTTTATGCTCGACTTGGTTCGCTTGGTATCCCACTCAGGGATAGCGAGCAAAGTGATGATGCTGAAGGAACTCCAGATGATTACTATGATGCTGAGATATTGGATGAGATGACAACCAACAGGGGAGAGTTGAAACTTAGAACTGTAAGCATCAGTAATAAAAACCACAGCCACAGCAGTGACAACGGCAGTGAAGACAAACAGTTCCAAGTTCACCCTGAAGATGCTGTCCGAATATGA 2259 0.4285 MHCPSLSLSPTPPKTHRALERERSPPSSVIFILRGPFSSIPPFFSHITSSGQGPPPSLPFIQIIAFLLNLQKFPPSTMGSIGMPFEGIIQDIKGRVECYKQDWFSAICSGAGILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVESLTSTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFCKKTPELGAELFLAWAGWVCVWTAFMLILLAIFNACNIISRFTRIAEELFGMLITVLFFQEAIKGVMEEFHKPKTKDPLSEQFKLPWRYANGLLAIIFSFGLLLTALKTRRARTWRYGTGWLRGFIADYGVPMMVVLWTALSYTVPRGVPDGVPRRLICPLPWEPASLYHWTVVKDMGKVPSVYILGAIIPAVMIAGLYFFDHSVASKMAQQKDFNLSKPSAYHYDLFLLGIMTLLCGIFGLPPSNGVLPQSPMHTKSLAVLRRQLIRKRVMKSAKECIRLQRTNSELIGKMQAVFVETDTAPTDKEMETLKKAVMKSDTRDGTKENFDPVKNIEEYLPVRVNEQRMSNLLQSLLIGVSIFAMSIIKRIPTSVLWGYFAYMAIVSLPGNQFWERILLLFITPGRRYKILEGSHASFVEKVPFKTIAAFTGLQIAYFLFCFGVTWIPVGGILFPLPFFFLIPIRENLLPKLFRPSHLQELDASEYEEIVYARLGSLGIPLRDSEQSDDAEGTPDDYYDAEILDEMTTNRGELKLRTVSISNKNHSHSSDNGSEDKQFQVHPEDAVRI* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01430 752 Coils Coil 752 752 - -
Rops10g01430 752 Pfam HCO3- transporter family 84 260 IPR011531 GO:0006820|GO:0016020
Rops10g01430 752 Pfam HCO3- transporter family 276 451 IPR011531 GO:0006820|GO:0016020
Rops10g01430 752 Pfam HCO3- transporter family 526 616 IPR011531 GO:0006820|GO:0016020
Rops10g01430 752 MobiDBLite consensus disorder prediction 732 752 - -
Rops10g01430 752 MobiDBLite consensus disorder prediction 1 23 - -
Rops10g01430 752 Gene3D Helical hairpin bin 95 137 - -
Rops10g01430 752 PANTHER ANION EXCHANGE PROTEIN 80 674 IPR003020 GO:0005452|GO:0006820|GO:0016020
Rops10g01430 752 MobiDBLite consensus disorder prediction 723 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01430 Rops-Chr10 27415275 27420250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01430 78 749 Antiporters AT4G32510 65.058 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01430 K24194 - gmx:100787412 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01430 10 27415275 27420250 Rops10g01430 10 27415275 27420250 ECH