Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01423 ATGGATGTGTCTGTTGACGGGGATCCCGTTGAAAAGATGATTTTTGAGCTTTTCTTTGATGTTGCTCCCAAGACTGCAGAAAACTTTCGCGCATTATGTACAGGAGAAAAAGGTATAAGTTCAAACTCTGGTAAACCACTGCACTACAAGGGTTCTTTCTTCCATTGCATTATAAAAGGCTCAATTGTGCGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCAACATTCCCAGATGAGTCACCTAGGCTAAAGCATGATGCCCCAGGCCTTTTGTCGATGGCTATTGCTGATCGTGACACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTTTTTGGGAAGCTTGTGCAAGGGCATAATGTATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATAATTAATTGTGGTGAATCTAGTGAGGATGGAAAGAAGGTAAATAAATCCAAAATAGGAAGAGATGGATCTTCTGAAGCCAATAGTCATGAAATACGGAGGAAGGCAAAGCACAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAGATACTACTCCTCTGAATCGGGGAGTTCTTCAGATTCAGACATGGAATCTTCAGAATCTGATAGCGATTCCGAGTCAGATATATCATCATCATCTGACGTAAGTTCCTCCAGTGATGACAGGCGAAGGAAGAAAAAGAGATCTAAGAAAGATAAATCTAGACGTGGAAAAAGAAGAGATAAACGCCGTGACAAGAGGCGGAGGAGACGTGACAAGAGATCAAAGCGTAGATCAAGAAGGGAATCAGGCAGTGATTCAGATAGTGTGAGTAACAGTGACAGTAGCTCTGATGATGAAAGTCCTGATGGTCAACAGAAAGAGCTGAAGCGTAAAGATCAGTCTCAGAAAGCAGCTGACACAAAATCTCCCTTGGTTGTGGAGAAGGATGTACCTTCCGTGCGTCATAGAAAGGAGGAAGTGGGTATGCTAGAGAATGAGGAAAAAATTCCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCATTGGAGCTGACTACAGATCTGACAGAAGTGAAGAGAGGCAGCCTGATGTTATGGATTATCATTCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTAAACGAAGCGTGAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTGAGAGCAAGAGCCCAAGCGTTACTCCAAAAAGGAGATTAAGCAAAAGTCCAAGTGTTAGTAGAAGCCCTCCTCCATCAAGGAGGAGTTTGAGCAGAAGTCCTGTTAGAAGCATCAGCAGGAGTCCAAGCAGAAGCATCAGTAGAAGTCCAGTGAGGGGCAGGAAAGGGCGAAGTGTCAGTAGAAGCCCTGTGAGAACTCGTTCTCTTAAAAGTGTAAGTCAGAGCCCTGTAAGATCCCTTTCTCGAAGCCGCCGGAGCAGGAGTTCTCCCAGAGCATCATCACGAAAAACAAGCAGCAGAAGCCCTGTAAGAGTATCAAGAAAGAGTCTAAGCCGCAGTCCAGTTAGGTCACCTGCTAGAAGCCTAAGCAGAAGTTCTGGCAGGGTCCCTTCAAAGAGAAGAAGCATTAGCGGAAGTCCTGTCAGAGCACCAAGTAGAAGCAACCGTCGCAGTTATTCTAAGAGTCCTAGCCCTGTTCGCAGGACTAGGACGCCTCGTGGGAGGAGTGTGTCTAGGAGTGTTTCACCTGATGCTTCGCCTAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATATTCTTATGCAAGAAGGTACAGAACCCCCTCTCGGTCTCCTGTGAGGTCTTACCGCTATGGTGGAAGAAATGACCGTGACAGATATTCTAATTACAGAAGGTATTCTCCTAGGCGTTACAGGAGCCCACCACCACGTGGAAGAACCCCCCCAAGGTACCGGAGCAGGAGGAGCAGGACACCATCTGTCTCACGCAGCCCACGCTACAGAGCTCGGCGATACAGCCGTAGCCCAGTTCGCAGCCGTTCACCATACCGATCTCGCCCCTCTCCTCGTGTGGAGAGACGTGTGTCATATTCTCGGAGCAGGAGTCCGTCGAAATCCAGGTCTTCCGTGGAATCACAATCTCCTCCCGGAAAAGCAAGTAGAGACGGCAGGTCAGGGTCATCGTCCAAAAGTCCAGATGGGAAGAAAGGCCTGGTCTCATATGGCGAAGGTTCTCCCTATTCGGGCCAAAGGTGA 2280 0.4667 MDVSVDGDPVEKMIFELFFDVAPKTAENFRALCTGEKGISSNSGKPLHYKGSFFHCIIKGSIVRGGDFVNRNGTGGESIYGSTFPDESPRLKHDAPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNVLKKIEDVGDEEGHPTVTVKIINCGESSEDGKKVNKSKIGRDGSSEANSHEIRRKAKHKKSSKDRRKRRRYYSSESGSSSDSDMESSESDSDSESDISSSSDVSSSSDDRRRKKKRSKKDKSRRGKRRDKRRDKRRRRRDKRSKRRSRRESGSDSDSVSNSDSSSDDESPDGQQKELKRKDQSQKAADTKSPLVVEKDVPSVRHRKEEVGMLENEEKIPKENGERRSNGIGADYRSDRSEERQPDVMDYHSGKSRSRSMSPKRSVSKSMSISPRRSESKSPSVTPKRRLSKSPSVSRSPPPSRRSLSRSPVRSISRSPSRSISRSPVRGRKGRSVSRSPVRTRSLKSVSQSPVRSLSRSRRSRSSPRASSRKTSSRSPVRVSRKSLSRSPVRSPARSLSRSSGRVPSKRRSISGSPVRAPSRSNRRSYSKSPSPVRRTRTPRGRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYGGRNDRDRYSNYRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSRSPVRSRSPYRSRPSPRVERRVSYSRSRSPSKSRSSVESQSPPGKASRDGRSGSSSKSPDGKKGLVSYGEGSPYSGQR* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01423 759 MobiDBLite consensus disorder prediction 693 707 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 396 462 - -
Rops10g01423 759 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 172 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 506 590 - -
Rops10g01423 759 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 164 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 306 324 - -
Rops10g01423 759 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 163 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 Gene3D - 1 165 IPR029000 -
Rops10g01423 759 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 MobiDBLite consensus disorder prediction 476 497 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 625 640 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 709 742 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 335 390 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 161 759 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 164 190 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 592 612 - -
Rops10g01423 759 MobiDBLite consensus disorder prediction 191 205 - -
Rops10g01423 759 SUPERFAMILY Cyclophilin-like 1 165 IPR029000 -
Rops10g01423 759 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 164 IPR002130 GO:0000413|GO:0003755
Rops10g01423 759 MobiDBLite consensus disorder prediction 249 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01423 Rops-Chr10 27337493 27343687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01423 16 160 U-box Gene Family AT5G67530 40.136 1.36e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01423 K09566 - gmx:100800303 338.576