Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01422 ATGTCATCATCATCTCGTATTTTTGACACCATCGATGAATGTCTCTCCCTGATTCAATCTGATTCCCATGAAGCTCAGGAAAAAGCTCTTCAAACACTAGCTTCAATCACCAAGGTCAGTCCCCAAAACAGAACCTTGGTAGCTCAAACAGATGGAGCAATCCCAACATTAGCTACACTCACAAATGCTTCCTCCCCCATTATCCAAACACTTTCCTTGCTGATCCTCTTTAACATTTCCTTGAATCCTGATCTAAAGCAGTCCCTTGCAGATATGGAAACAATTTATTACCTAAATTCCCGTATTATTAGCTCATCAAGTTCTCTTGATTCATGCAAACTTGCCTCCTCATTGGTTTGCAGTTTGGCCATGCTTGATAAAAACAAGGCCAAATTTGGGGTGGCAGGTACACTTCAGTTGCTTGTGAAGGCTGTTGATGGCTCTCATGATTCTGATGCACATCACCTTTTGAGTTCTTTGGCTGAGCTTGTTCAGTTCCATGGAAACTGCACTTTAGCCGTGAGAGCTGGAGCAGTTCCAGCGCTACTAAGAATAGTACATAGCACTGATGATGAGGACTTGGCTGGAACTTCTCTTACTGTTCTTGGTCTCCTTGCAAGGTTTGAGGAAGGGTTAAATGGTCTGAAGAAAACCAATGAGATAATTAGTTTAATGTTAAGCGTGTTGAAAGGAAGGTCCTTGTTGAGCAAGGAGGGTGCAGCTGATATCCTTCTTCGCCTTTTTGATGACAGTGAAGACTCTGTAACTGAGGCTTTGATGTTACCAGAATTCTCAACTGTGTTAGCTGATCTTTGTGTTAGGGGTTCAGCAAGAGTTCGAGATAAAGCTGATTTGCTAATGAGAAAGATGGCAAAGGTGAGCTTGGATGCTAATATGGAAGTAAATATCTCCCTATATGTTTAA 924 0.4188 MSSSSRIFDTIDECLSLIQSDSHEAQEKALQTLASITKVSPQNRTLVAQTDGAIPTLATLTNASSPIIQTLSLLILFNISLNPDLKQSLADMETIYYLNSRIISSSSSLDSCKLASSLVCSLAMLDKNKAKFGVAGTLQLLVKAVDGSHDSDAHHLLSSLAELVQFHGNCTLAVRAGAVPALLRIVHSTDDEDLAGTSLTVLGLLARFEEGLNGLKKTNEIISLMLSVLKGRSLLSKEGAADILLRLFDDSEDSVTEALMLPEFSTVLADLCVRGSARVRDKADLLMRKMAKVSLDANMEVNISLYV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01422 307 Gene3D - 4 292 IPR011989 -
Rops10g01422 307 SUPERFAMILY ARM repeat 10 291 IPR016024 -
Rops10g01422 307 SMART arm_5 166 207 IPR000225 GO:0005515
Rops10g01422 307 SMART arm_5 40 81 IPR000225 GO:0005515
Rops10g01422 307 PANTHER U BOX DOMAIN-CONTAINING 16 289 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01422 18 283 U-box Gene Family AT1G23030 26.296 2.90e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01422 - - gmx:121174819 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01422 10 27334417 27335340 Rops10g01422 10 27334417 27335340 ECH