Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01416 ATGGGTATGGCGGTTCAGTGTTTATCATGTGCTCGCTTCCTAGTAGGAACCCAATCTATTCCTTTCCAAAGGAAACCTTTTCTCTGTTCTTTCCTTCTTTCCTTTCGTCCTCGTAACCTCTCTTCTTCAATTGTCGCTGCCTCTTCCAGAAAGAAAACCAAGAAAAAATTGTCTCAAAGTCGTGTTACAAAGGGGGATGATGCTGATGAGGATGCATTTGAGCTGCTTTTCAAGCAACTTGAAGAAGATCTCAAAAACGATGATATGTCCAATGATGATGGCAGTGATGATGGCAGTGATGATGAGATAACTGAAGAGGACATGGCCATGTTAGAACGTGAGTTACAAGATGCATTGGGGGACTATGATACTGAATTGTTAGACTCAGATATGAGTGACACTGAAGGTGGTGATGAACCAGAAAATGGTAATGATGATGATGATGGAGATGAAAGGTCGCTGAAGCTTAGAAATTGGCAACTCAAGAGATTGGCTAGAGCTTTAAAAGCTGGCCGCCGCAAAACAAGTATAAAAAACCTTGCTGCAGACCTTTGTCTTGATAGAGCTCTTGTTCTCGAATTGCTTCGCAATCCTCCTCCAAATCTTCTAATGATGAGTCTATCATTACCTGATGAACCCACAGCACCGGTATCATCACTTGAAATTACACCCGGAGAGACTGTTCTTAAAGAAATAAGTAAAGATCGTGTGGAATCTGAATCCAAGGCTCAAGTACCTATTCATGCCATGCAACGTAGTTGGTCTGCTCAAAAGAGATTGAAAAAGGCCCATGTTGACACTCTGGAGAGGGTTTATAGGAGATCAAAAAGGCCCACTAATGCAATGATCAGTAGTATCGTGCATGTAACAAACATTCCTCGAAGAAGAGTTGTCAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGAGTTCCAGATCACCGTCTTCCTTACCAGCGCTCTGTTCCTGAAACTGCTTGA 978 0.4264 MGMAVQCLSCARFLVGTQSIPFQRKPFLCSFLLSFRPRNLSSSIVAASSRKKTKKKLSQSRVTKGDDADEDAFELLFKQLEEDLKNDDMSNDDGSDDGSDDEITEEDMAMLERELQDALGDYDTELLDSDMSDTEGGDEPENGNDDDDGDERSLKLRNWQLKRLARALKAGRRKTSIKNLAADLCLDRALVLELLRNPPPNLLMMSLSLPDEPTAPVSSLEITPGETVLKEISKDRVESESKAQVPIHAMQRSWSAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVTNIPRRRVVKWFEDKRAEEGVPDHRLPYQRSVPETA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01416 325 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 20 318 - -
Rops10g01416 325 MobiDBLite consensus disorder prediction 126 152 - -
Rops10g01416 325 MobiDBLite consensus disorder prediction 126 147 - -
Rops10g01416 325 ProSiteProfiles 'Homeobox' domain profile. 251 311 IPR001356 GO:0003677
Rops10g01416 325 Gene3D - 253 311 - -
Rops10g01416 325 Pfam Homeodomain 259 307 IPR001356 GO:0003677
Rops10g01416 325 SMART HOX_1 250 315 IPR001356 GO:0003677
Rops10g01416 325 CDD homeodomain 254 306 IPR001356 GO:0003677
Rops10g01416 325 SUPERFAMILY Homeodomain-like 253 314 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Rops10g01416 Homeodomain 4.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01416 - - gmx:100798718 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01416 10 27238305 27241150 Rops10g01416 10 27238305 27241150 ECH