Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01404 ATGAATTCAAGTCTCACGAGCCATCTTGCGCAGTGCTCAATCGTCACCGCTTCTGGTTTCGAAACCAATTTTCCCACCAAATTACAACGGTCATCTTTCTCAACAGTCAAATCTCTCCTCGACAAGCCCAACAACCATGCTTCTTCCGATGTAGCAGTCTCAAGTAGCAGAAGGAGAGGGTTAATATGCATAGCCACGTTGCCATGTCTTCTCCCTCTAAGTCAAATCATTGGTTGTCTCCAAGCCAATTCAATGCAGCCAGGTACAAAGGAATATCTTCTTATTAAAGAAGAGGTGAGGAAGTTTTTGTCGAAGGGAAAGGCTGCAGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACCTTTGAAATCAATGACAATACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCAGAAAATGGTGGCCTGAAAAAATCAATAAAGGTTTTACAGAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCCTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAATATGTGGAGGTCCATCTATCCAAATTTCAATGGGCAGACTAGATTCACTGGAGCCTGATCCTGAAGGGAGACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTGGCTTTGTCTGGAGCCCACACACTTGGAAGTAAAGGTTTTGGAAGCCCGGTTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCATGGATGTCTTCAGGTGGTATGCTGAGTATGATCGGCCTTCGTTCAGATCATGCACTTGTGGAGGATGATGAATGCTTAAGATGGATCACAAAATATGCAGACAATGAGAATATGTTCTTTGAAGATTTCAAAAATGCTTATGTCAAGCTAGTGAATTCTGGTGTGAGGTGGAATAGCTTATGA 972 0.4249 MNSSLTSHLAQCSIVTASGFETNFPTKLQRSSFSTVKSLLDKPNNHASSDVAVSSSRRRGLICIATLPCLLPLSQIIGCLQANSMQPGTKEYLLIKEEVRKFLSKGKAAGVLRLVFHDAGTFEINDNTGGMNGSIVYELERPENGGLKKSIKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEICGGPSIQISMGRLDSLEPDPEGRLPEESLNASGLKKCFQRKGFSTQELVALSGAHTLGSKGFGSPVSFDNSYYKVLLEKPWMSSGGMLSMIGLRSDHALVEDDECLRWITKYADNENMFFEDFKNAYVKLVNSGVRWNSL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01404 323 FunFam Adenylate/guanylate cyclase 208 310 - -
Rops10g01404 323 Pfam Peroxidase 97 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 92 321 IPR044831 GO:0004601|GO:0034599
Rops10g01404 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 230 240 IPR019793 -
Rops10g01404 323 FunFam L-ascorbate peroxidase 98 216 - -
Rops10g01404 323 ProSitePatterns Peroxidases active site signature. 108 119 IPR019794 GO:0004601
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 224 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 294 318 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 185 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 108 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 206 223 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 166 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Plant ascorbate peroxidase signature 126 136 IPR002207 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 ProSiteProfiles Plant heme peroxidase family profile. 108 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 SUPERFAMILY Heme-dependent peroxidases 94 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Haem peroxidase superfamily signature 185 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Haem peroxidase superfamily signature 108 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Haem peroxidase superfamily signature 167 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g01404 323 Gene3D Peroxidase, domain 2 208 310 - -
Rops10g01404 323 Gene3D - 96 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01404 Rops-Chr10 27044418 27048308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01404 95 313 Peroxidase AT1G14540 29.151 4.83e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01404 K00434 - gmx:100792735 507.679