Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01393 ATGTTCGCAGAAGAGAATGGGCTTAAGGGAGACCCAAGGTTGAGAGGCATATCACAAGCCATCAGAGTCGTTCCTCACTTCCCCAAAAAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAAGGCGTTTAAAGACACTATCGACATTTTTGTCGATCGTTACAGAGACAGGCACATTTCAGTTGTTGCCGGAATTGAAGCAAGGGGATTCATGTTTGGTCCCTCAGTTGCATTAGGCATTGGTGCAAAGTTTGTTCCTTTGCGCAAACCTCGGAAGCTGCCAGGTGAAGTGATTTTTGAAAAATACTCTTTAGAATACGGGAAGGATTGTTTGGAGCTGCATGTTGGTGCTGTCCAGCCCGGTGAACGTGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTATCAGCAGGAATAAGACTTCTAGAACGTGTTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATTGGTGTGCCTGAGGTCAAGCCTTCTCTTTCAGGGACAGTGCAAACTCATCGGAAAGCCACTTTATGTCCTTGTGGAGCCGAGTCAAGCAGATTCATGTTTTTGAGATGTGGTGATTTGAATGCTTCTCCGGCTGACATGCAAAAGGACACTTGGTCTTGGAAACACAGGCCATAA 660 0.4545 MFAEENGLKGDPRLRGISQAIRVVPHFPKKGIMFQDITTLLLDHKAFKDTIDIFVDRYRDRHISVVAGIEARGFMFGPSVALGIGAKFVPLRKPRKLPGEVIFEKYSLEYGKDCLELHVGAVQPGERAIVIDDLVATGGTLSAGIRLLERVGAEVVECACVIGVPEVKPSLSGTVQTHRKATLCPCGAESSRFMFLRCGDLNASPADMQKDTWSWKHRP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01393 219 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 168 - -
Rops10g01393 219 CDD PRTases_typeI 51 166 IPR000836 -
Rops10g01393 219 Gene3D - 6 177 IPR029057 -
Rops10g01393 219 Hamap Adenine phosphoribosyltransferase [apt]. 17 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops10g01393 219 FunFam Adenine phosphoribosyltransferase 1 5 180 - -
Rops10g01393 219 SUPERFAMILY PRTase-like 19 165 IPR029057 -
Rops10g01393 219 Pfam Phosphoribosyl transferase domain 42 165 IPR000836 -
Rops10g01393 219 NCBIfam adenine phosphoribosyltransferase 18 169 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01393 Rops-Chr10 26897203 26900959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01393 11 168 PRT Gene Family AT1G27450 74.051 1.63e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01393 K00759 - gmx:100499904 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01393 10 26897203 26900959 Rops10g01393 10 26897203 26900959 ECH
Rops10g01393 10 26897203 26900959 Rops9g01916 9 34941252 34944935 ECH
Rops9g01916 9 34941252 34944935 Rops10g01393 10 26897203 26900959 PCT