Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01365 ATGAATCCACACAAGCTTGTTTTCTTATTTCTCAGGGACATAGAAGAAACAATGAAAATGAAGCTTCTTATGTTTCTCATGCTGATGCTTCTTATTCTTCACGATCACGTTGCTGCAGACCCTTTTGTTTCCTCACCTCAACTCCCACCTATTACTCCACTTTCCACCTCCATTCCTGTTTTCTCCCCAGGTACTTATTCAGCTTTCTCTCTCTCTTCCCCCTGTTCCATGCCTGTTTTCTCCCCAGACCCTCAGGTGGGGGAGGAGCAGCACCAAAAAGATTTGCACAAGAAAATGGTAATAGGTATCGTCGTAGCAAGCAGTGCACTTGGTGCAATCATTTTGGGATTGTTATGCTTCTGGATTTATCATAGAAAGCATTCATCAAAATCCAATAGGAAAAATGTTCAAAGCTCAGATGCAGAAAAGGGGCTTACCATAGGCATGGCATCATTTTTGAGTAGATTCAGTTCCATAAAGGTGGTTGGTATGAAGGGGTCTGCTCCAATAATTGAGTATGAGCAAATAGAAAAAACGACTAATAATTTTCAGGAAGGTAACATCTTGGGTAAGGGCGGTTTTGGATGTGTTTACAAGGCTCGATTGGATGATAATTTGGATGTTGCCGTCAAGAAACTAAATTGTGAAAGTCAAAATGCTGAGAGAGAATTTGAGAACGAGGTGGATTTGTTGAGTAAAATTCAGCATCCAAATATAATTTCTATACTGGGTTGTAGCATCAATGGTGACACGAGGTTTATTGTGTATGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGATCATGTCATGGCTCGGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCTAGAGGATTAGAATATCTGCATGAGCACTGTTACCCTGTGGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTCTCTGATTTTGGTCTTGCCATTATTGATGGGTCCCAAAACAAGAAAAACATTAAGCTTTCAGGCACATTGGGGTACGTAGCCCCGGAATATCTTTTAGATGGAAAATTGACTGATAAGAGTGATGTTTATGCTTTCGGGGTTGTGCTCTTGGAACTCTTATTAGGAAGGAGGCCCGTGGAAAAAGTGGGCCCAGCTCAGTGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGGTCCAAACTTCCAAACATTGTGGATCCAGTGATTAAGAACACAATGGATCTCAAGCACTTATACCAGGTTGCTGCGGTAGCTGTGCTGTGCGTGCAACCAGAGCCGAGTTACCGCCCATTGATCACAGATGTTCTTCACTCGCTTATCCCTCTTGTTCCCATAGAGCATGGAGGAACACTCAGAGTTTCACAGCATGTTCTTCTTGCAGATCCACCTGTGAATTCCACTCGTTGA 1449 0.4258 MNPHKLVFLFLRDIEETMKMKLLMFLMLMLLILHDHVAADPFVSSPQLPPITPLSTSIPVFSPGTYSAFSLSSPCSMPVFSPDPQVGEEQHQKDLHKKMVIGIVVASSALGAIILGLLCFWIYHRKHSSKSNRKNVQSSDAEKGLTIGMASFLSRFSSIKVVGMKGSAPIIEYEQIEKTTNNFQEGNILGKGGFGCVYKARLDDNLDVAVKKLNCESQNAEREFENEVDLLSKIQHPNIISILGCSINGDTRFIVYELMQNGSLEAQLHGSCHGSALTWHMRMKIALDTARGLEYLHEHCYPVVIHRDLKSSNILLDANFNAKLSDFGLAIIDGSQNKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRRPVEKVGPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIEHGGTLRVSQHVLLADPPVNSTR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01365 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Rops10g01365 482 PANTHER OS01G0750732 PROTEIN 41 458 - -
Rops10g01365 482 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Rops10g01365 482 Gene3D Transferase(Phosphotransferase) domain 1 259 459 - -
Rops10g01365 482 CDD STKc_IRAK 189 456 - -
Rops10g01365 482 SUPERFAMILY Protein kinase-like (PK-like) 161 453 IPR011009 -
Rops10g01365 482 Coils Coil 210 230 - -
Rops10g01365 482 ProSiteProfiles Protein kinase domain profile. 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01365 482 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01365 482 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01365 482 Gene3D Phosphorylase Kinase; domain 1 146 258 - -
Rops10g01365 482 FunFam probable receptor-like protein kinase At1g80640 259 458 - -
Rops10g01365 482 FunFam Protein kinase superfamily protein 150 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01365 Rops-Chr10 26482936 26487095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01365 70 399 Receptor kinase-like Gene Family AT1G80640 48.649 1.23e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Rops10g01365 Pkinase 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01365 - - gmx:100785380 644.039