Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01342 ATGGCTGATTGTTTTAGAACTGCCTCTGCTTCTTCTCTTTTGCTCCTGTTCCTTGTCTTTGGTTTGTCTGCAGCTAAGGAACTATTAGTTGGAGGGAAGATAGATGCATGGAAGATTCCATCTTCTGAAGCAGAATCCCTCAACCAATGGGCTGAAAGGTCTCGTTTCAAAGTTGGCGATCATCTTGTATGGAAGTATGATGGTGAGAAAGACTCAGTTTTGGAAGTAAACAGTGAGGATTATGCTAAATGCAGCACCTCCAACCCCATTGAAGAGTATAAAGATGGGAACACTACGGTGAAGCTTGATCGTCCTGGACCATTCTACTTCATCAGTGGGGCAAAGGGTCACTGTGAGAAGGGACAAAAGGTCATTGTGGTGGTCATGTCTCCAAAGAGCAGATACATGGCAATTTCTCCTGCACCTTCTCCAGCAGAGTTTGAAGGTCCAGCTGTTGCTCCAACTAGCAGTGCCACAGCGTTGCAAGGTGCCCTTGTGACTGCTGCTATGGGAGTATTATTGGCTATGTATGTGGGTTTTCTCATGTGA 549 0.4572 MADCFRTASASSLLLLFLVFGLSAAKELLVGGKIDAWKIPSSEAESLNQWAERSRFKVGDHLVWKYDGEKDSVLEVNSEDYAKCSTSNPIEEYKDGNTTVKLDRPGPFYFISGAKGHCEKGQKVIVVVMSPKSRYMAISPAPSPAEFEGPAVAPTSSATALQGALVTAAMGVLLAMYVGFLM* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01342 182 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
Rops10g01342 182 FunFam Early nodulin-like protein 1 25 133 - -
Rops10g01342 182 CDD OsENODL1_like 26 129 IPR041846 -
Rops10g01342 182 Gene3D - 24 134 IPR008972 -
Rops10g01342 182 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
Rops10g01342 182 PANTHER BLUE COPPER PROTEIN 27 144 IPR039391 GO:0009055
Rops10g01342 182 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01342 Rops-Chr10 26140051 26140849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01342 8 181 Phytocyanin Superfamily AT4G31840 51.955 7.19e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01342 - - gmx:100305551 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01342 10 26140051 26140849 Rops10g01342 10 26140051 26140849 ECH
Rops9g01968 9 36368138 36369353 Rops10g01342 10 26140051 26140849 PCT