Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01331 ATGGGTTATTTCAATTCAGTTTTGTCCTCTTCTTCAAGCCAGGTTCATGCCAACGATGATGTACCTGTGAGTGGTGGGGGTCTCAGCCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAGGAGATCTTCGATGGAAGATTTTTATGAGACAAGAATTGATGGTGTGGATGGTGAACTTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGTTCGAGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTGATCAACCACCCAAAATTCATTTCTGACACCAAATCAGCAATAACTGATGCATATAACCATACCGACTCTGAATTTCTGAAATCAGAAAATAGTCATAACAGAGATGCTGGCTCTACCGCATCCACTGCCATTCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCACGAGCTGTTATATGCAGGGGTGGTAATGCAATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCGGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTTCTGAAGCAGTATGTTGTTGCAGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGTTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGACGCAGAGGAGGCAGCGAAGAGACTGTTGCAAGAAGCATCACAGAGAGGTAGTGCTGACAATATCACGTGTGTTGTTGTTCGTTTCTTGATGAACCAAGGCTCTTCTTCTCTGAGGAGCTCCGGGTAA 885 0.4418 MGYFNSVLSSSSSQVHANDDVPVSGGGLSHNGKFSYGYASSPGRRSSMEDFYETRIDGVDGELVGLFGVFDGHGGVRAAEYVKKNLFSNLINHPKFISDTKSAITDAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLLQEASQRGSADNITCVVVRFLMNQGSSSLRSSG* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01331 294 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Rops10g01331 294 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Rops10g01331 294 PANTHER PROTEIN PHOSPHATASE 24 280 IPR015655 GO:0004722|GO:0006470
Rops10g01331 294 Pfam Protein phosphatase 2C 42 274 IPR001932 -
Rops10g01331 294 CDD PP2Cc 34 281 IPR001932 -
Rops10g01331 294 FunFam probable protein phosphatase 2C 59 27 285 - -
Rops10g01331 294 SMART PP2C_4 25 279 IPR001932 -
Rops10g01331 294 Gene3D - 27 285 IPR036457 -
Rops10g01331 294 ProSiteProfiles PPM-type phosphatase domain profile. 35 281 IPR001932 -
Rops10g01331 294 SMART PP2C_SIG_2 30 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01331 Rops-Chr10 26037206 26042922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01331 1 289 PP2C-type Phosphatase Gene Family AT4G31750 89.078 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01331 K17506 - gmx:100797070 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01331 10 26037206 26042922 Rops10g01331 10 26037206 26042922 ECH