Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01327 ATGAGAAGCATCTCTACCACAACATTAGCACCCGTGTCCACAGCTTCTTTGACAAGTGGTCAGCACTCTTCATGGCACTCTCCAGTTCCTTACCTGTTTGGAGGGTTAGCTGCTATGTTGGGTCTCGTAGCCTTTGCGCTACTGATCTTAGCTTGCTCTTACTGGAAACTTTTTGTTCAATTGGAGCAGAACGAAGAAAACAGAGAGAGAGACTTGGAGAGTGGTGAGAAAGAGGGTGGTGGTGATTCTGCAAAATCCGTGAAGGTCTATGAAGAGAAGATTCTGGTCATTATGGCTGGAGATGAGAACCCCACATTCTTAGCCACCCCTGTTTGTCCAAAGTTCTCCTCGTCTTTCCCTGATGGAGTTGGGAACCATTTTCCCAAAGACCTCCAAATTCATGAAACTTGTGAGAAATCAGAAAAAGAAATGGAAAACCCTCTTCAACGACCACCTACAACAACTCAACCACCACAAGAAACCCAACAACAGAGCCAGTGCCAGTAA 507 0.4576 MRSISTTTLAPVSTASLTSGQHSSWHSPVPYLFGGLAAMLGLVAFALLILACSYWKLFVQLEQNEENRERDLESGEKEGGGDSAKSVKVYEEKILVIMAGDENPTFLATPVCPKFSSSFPDGVGNHFPKDLQIHETCEKSEKEMENPLQRPPTTTQPPQETQQQSQCQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01327 168 MobiDBLite consensus disorder prediction 131 146 - -
Rops10g01327 168 MobiDBLite consensus disorder prediction 126 168 - -
Rops10g01327 168 Coils Coil 58 78 - -
Rops10g01327 168 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 144 IPR040359 GO:0080143
Rops10g01327 168 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01327 Rops-Chr10 25966346 25967104 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01327 16 110 Glutamine Dumper (GDU) Family AT5G57685 61.458 3.34e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01327 - - gmx:100500572 176.022