Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01293 ATGTATGATACATCATTTGAGGTTCTGCATTTTGACGGATCTGGCAAATTTAATTCCATTGCCATTACCTGTTACAAAAACAGGGTGAGGTTGATGATGGCTACTATTGAGATGGGGACAGAGGTAGAGTCTGTGAAGTGCTATTGCTGCGGGTTAATGGAGGAGTGCACGGTGCCGTATATTGATCGTGTTAGAGAGAGATATCAGGGTCGTTGGATTTGTGGGCTGTGTGCTGAGGCAGTGAAAGAGGAGGCAATGAAATCAGAGAGAGATATTCCCACTGATGAAGCACTTAAGCGCCACATGAATTTTAGATCTTCTATTTCTAGTCCTCCCAATAAACCAACCCAAGATTTGATCATTGCAATGAAACACCTTCTATTTCGCTCTTTGGATTCTCCCAGGAAGCAACAACCTTTTACTTTTCCACCTCTTGGTAGTACCTGCTTTTCAACTCAGGAAGAGCCACAATCCCAGACTAGAGAGTAG 489 0.4335 MYDTSFEVLHFDGSGKFNSIAITCYKNRVRLMMATIEMGTEVESVKCYCCGLMEECTVPYIDRVRERYQGRWICGLCAEAVKEEAMKSERDIPTDEALKRHMNFRSSISSPPNKPTQDLIIAMKHLLFRSLDSPRKQQPFTFPPLGSTCFSTQEEPQSQTRE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01293 162 MobiDBLite consensus disorder prediction 135 162 - -
Rops10g01293 162 PANTHER OS01G0745000 PROTEIN 36 138 IPR012876 -
Rops10g01293 162 Pfam Protein of unknown function (DUF1677) 42 129 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01293 Rops-Chr10 25514454 25515197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01293 - - gsj:114408868 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01293 10 25514454 25515197 Rops10g01293 10 25514454 25515197 ECH
Rops2g05125 2 91881770 91882734 Rops10g01293 10 25514454 25515197 ECH
Rops4g01813 4 42512977 42514395 Rops10g01293 10 25514454 25515197 ECH