Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01285 ATGCCCGAACTCACTATGAATCTGCGGAAGGGCTCCAAGGTTTGGGTCCATGACAGAGATTTGGCTTGGGTGCCTGCTGAAGTTCTCGAATCTTCCGGAAACCAAATTCGCCTTGCAACCGCTACAGGCAAGAAGGTTCTTGCTTTGCCGGATAAACTGTTTCTGAGGGATGCGGATGAAGACGAGCATGGTGGAGTGGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTTCAGAGAAGATATGCACTCAACGATATTTATACATATACTGGGAGCATTTTAATAGCTGTCAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAAGGAAGCTCCATTGGGTGAGCTTAGTCCACATGTATTTGCTATTGCTGATGCATCTTATAGAGCAATGATGAACGAAGGTCGAAGCCAATCTATCTTGGTAAGTGGTGAAAGTGGTGCTGGGAAAACTGAAACAACAAAACTGATTATGAAGTATCTTACCTTTGTTGGTGGGCGTGCTGCTGGCGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACAGTCAGAAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCAGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACAGATCCAGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCAGAAAGGGATGTAGAGAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTAAACCAAAGTAAAGTTTATGAGTTAGATGGGATAAGCAGTGCAGAAGAATACGTGAAGACGAGGAGAGCAATGAGTATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATCTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAATAAAGGATGAGAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAGCCACGTGCTTGAACTCCCGTTCCGTTCGGATGCTGACGTGGCGGTGGAGGAAGCCCCTGATTGTTTCCTTTTCGTGGCGGAGACGGAGGGAATCGGCGAGGTGAGGGCCTACACAGTGGAGATTCATCCCGGCGTGACGAAGATCGTGGTGAGGGATGGTGGGTCGGTGGAATTGTCGTTGGATCAACTTGAACTTGATATGCAGAGGTTTCGCTTGTCGGAATCAACGCGGCCGGAGCTTGCCAGTGCGGTGTTCGTCGACGGGGAACTCATCGTGACGGTGCTGAAGGGATTGCAGAATCTTGAGGGTGGGGATGGTGATAATGATAGAGAAAAACGTGGCCTTTAGTGTGATTTGAACCTACTGCTATCAACATTATGTACCCGTTCAATACAAACCCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCAGCTGTTGCTGGTCGGGATGCTCTGGCAAAAACTGTCTATGCTCGATTATTTGATTGGCTTGTTGAAAAGATCAATAGGTCTGTTGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATTTATGGTTTCGAGTGCTTTAAGGATAATAGTTTTGAACAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAATATAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCGACACATGAAACATTCTCAACCAAGTTGTTTCAGCACTTTGGTGCCCACCCTAGGTTAGAAAAGGAGAAATTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACTTACCATACAAACACCTTTATAGACAAAAATCGGGATTATATAGTTGTAGAACATTGTACTTTATTATCTTCTTCAAGATGCCCCTTTGTGTCGGGTCTTTTTCCTTTGCTACCAGAGGAATCTTCAAGGTCATCATCGTACAAGTTTTCTTCTGTGGCTTCTAGATTTAAGCAACAACTTCAAGCACTCATGGAAACGCTCAACACAACAGAGCCTCATTACATTCGATGTGTCAAGCCAAATTCTTTAAATCAACCACAAAAGTTTGAGAATACAAGTGTCATACATCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCTGGTTACCCCACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAACTGCTCTTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTCAGAAAATAGTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTCTAGGCGTGCAGAAGTTTTGGACAATGCTGCGAAGTGTATTCAGCGTCAACTGCAAACATTTATTGCACGCAGGGATTTCAACTCAATCCGAGCTGCTGCTTTTTCTCTTCAAGCATGCTGCAGGGGATGCCTTGTCAGGAAGATGTATGCTTCTAAACGAGAGACAGCAGCAGCCGTCTTCATTCAGAAATATATTCGTATGTGTCTGATGCGGCATTCTTATGTGAAACTGTATTTTTCTGTTATTATCATACAATCCCATGTTCGTGGCTTCACAACTTGCAAATGGTTCTTGCACATAAAAGAACACAAAGCTGCTACTCTTATTCAGGCCTATTGGAGGATGTGCAAGGTTCGGTCTGCTTTCCAACAACATCAAGGTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAGCTTCGCAGACTCAAACAAGAGGCTAATGAAGCTGGTGCCCTGCGTTTAGTGAAGAATAAACTTGAGAAACAATTGGAAGAGCTCACCTGGCGTTTGCATCTTGAAAAAAAAATAAGGGTGTCTAATGAGGAGGCTAGGCAAGTTGAGATTTCCAAACTTCAGAAGATGTTGGAAGCTCTGAATTTTGAATTAGATGCTGCTAAATTGGCAACAATTAATGAGTGCAACAAGAATGCAGTTTTGCAAAATCAATTGCAATTGTCAGCAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAATTGCAATGGATGAAGTGCGGAGGGAAAATGCTCTATTGAAGGGTTCTTTAGATGCCTTTGAAAAGAAGAGTGCAGCTTTGGAGCTTGAGCTTGTGAATGCTCAAAAAGATCATGATGAAACCATTAAAAAAATGAGGGAGTTTGAACTGAAGTGTTCTCAACTTGTGCAAAATGTGAAAAGTCTTGAGGAAAAGCTATCAAGTTTAGAGGATGAAAATCACATGCTTCGTCAGAAAGCCTTAAGTGTATCTCCAAAGAATAACCAACCTGTTTTTACAAAGTCATTGTCAGAAAAATACTCAAGTGCATTAGTTTCCAACACTGAGCGAAAGCCCATATTTGAATCACCCACACCCACAAAACTTGTTGCCCCTTTTGCACTTGGCTTGTCAGACTCTCGTCGATCCAAATTAACCGCAGAAAGGCATCAGGATAACTATGAATTCCTCACCAGGTGTATCAAAGTGGATTTAGGGTTCATAAATGGTAAACCTCTGGCTGCTAGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATATTTGATTACATAATTGATGGGATTAACGATGTCCTAAAGGTTAGAGATGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCAGCACTTCTATGCCTCTTACAGAGGAACTTGCATTCAAATTCAAATGGCTTTTTAGCTACCACTGTTCAACGTTATGGTGGATCATCTGGCTTGACCAGCCGGATTGGGCATGGACTGAAATCTCCACTGAAGTTTATTGGATATGATGATGGTTTGTCTCGTGTGGAGGCAAGATATCCAGCTATACTTTTTAAACAACAACTAACTGCTTGTGTTGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAACTTTCTCCACTCCTTGGATTATGTATTCAGGCACCAAAAGCAGGGAGAATCCAAGGTGGAAAATCATCTAGATCTCCTAGTGGGCTTCCTCAACAATCACCTGGTGGTCAGTGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCCGGTTACATGCAAATCATGTACCATCTTTCTTCATCCGCAAGCTAGTTACGCAGATTTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTATCACAGAACTGGAGAAATGGATAGCTAATGCGAATGAGGAGTATGCAGGAACATCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACTTTGAGGCAAATCTATCGCATCAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCTAATGAGGCAATTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGAATTTGACCTCAAATTCGTTCCTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACCGACGATGTTGACCTACCAGCGTTTTTGTGTGAATATCCTTGTGCCCAGTTTCTTATTTTACATGAGAAGTAA 4923 0.4119 MPELTMNLRKGSKVWVHDRDLAWVPAEVLESSGNQIRLATATGKKVLALPDKLFLRDADEDEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKEAPLGELSPHVFAIADASYRAMMNEGRSQSILVSGESGAGKTETTKLIMKYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGISSAEEYVKTRRAMSIVGISHEDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHLQMAANLFSHVLELPFRSDADVAVEEAPDCFLFVAETEGIGEVRAYTVEIHPGVTKIVVRDGGSVELSLDQLELDMQRFRLSESTRPELASAVFVDGELIVTVLKGLQNLEGGDGDNDREKRGL*CDLNLLLSTLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVEKINRSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFGAHPRLEKEKFSETDFTVSHYAGKVTYHTNTFIDKNRDYIVVEHCTLLSSSRCPFVSGLFPLLPEESSRSSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNQPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLTALEFMDGSYDDKAATQKIVQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRQLQTFIARRDFNSIRAAAFSLQACCRGCLVRKMYASKRETAAAVFIQKYIRMCLMRHSYVKLYFSVIIIQSHVRGFTTCKWFLHIKEHKAATLIQAYWRMCKVRSAFQQHQGSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLVKNKLEKQLEELTWRLHLEKKIRVSNEEARQVEISKLQKMLEALNFELDAAKLATINECNKNAVLQNQLQLSAKEKSALERELIAMDEVRRENALLKGSLDAFEKKSAALELELVNAQKDHDETIKKMREFELKCSQLVQNVKSLEEKLSSLEDENHMLRQKALSVSPKNNQPVFTKSLSEKYSSALVSNTERKPIFESPTPTKLVAPFALGLSDSRRSKLTAERHQDNYEFLTRCIKVDLGFINGKPLAASIIYKCLLHWHAFESERTAIFDYIIDGINDVLKVRDDDIVLPYWLSNTSALLCLLQRNLHSNSNGFLATTVQRYGGSSGLTSRIGHGLKSPLKFIGYDDGLSRVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKAGRIQGGKSSRSPSGLPQQSPGGQWDNIIKFLDSLMSRLHANHVPSFFIRKLVTQIFSFINITLFNSLLLRRECCTFSNGEYVKSGITELEKWIANANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTLRQIYRISTMYWDDKYGTQSVSNEAISEMREIVSKDNQNLTSNSFLLDDDMSIPFSAEDIDMAIPAINTDDVDLPAFLCEYPCAQFLILHEK* 1641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01285 1639 Coils Coil 985 1029 - -
Rops10g01285 1639 MobiDBLite consensus disorder prediction 1409 1428 - -
Rops10g01285 1639 Gene3D - 785 851 - -
Rops10g01285 1639 PRINTS Myosin heavy chain signature 545 573 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 PRINTS Myosin heavy chain signature 598 626 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 Gene3D - 902 950 - -
Rops10g01285 1639 Gene3D - 852 901 - -
Rops10g01285 1639 Gene3D - 951 1000 - -
Rops10g01285 1639 Coils Coil 1093 1169 - -
Rops10g01285 1639 Gene3D Myosin VI head, motor domain, U50 subdomain 313 362 - -
Rops10g01285 1639 Gene3D - 254 311 - -
Rops10g01285 1639 MobiDBLite consensus disorder prediction 1413 1428 - -
Rops10g01285 1639 FunFam Myosin heavy chain 254 308 - -
Rops10g01285 1639 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Rops10g01285 1639 Gene3D - 557 741 - -
Rops10g01285 1639 Coils Coil 1041 1061 - -
Rops10g01285 1639 ProSiteProfiles Dilute domain profile. 1280 1582 IPR002710 -
Rops10g01285 1639 SMART MYSc_2a 58 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 SMART iq_5 900 922 IPR000048 GO:0005515
Rops10g01285 1639 SMART iq_5 971 993 IPR000048 GO:0005515
Rops10g01285 1639 SMART iq_5 948 970 IPR000048 GO:0005515
Rops10g01285 1639 SMART iq_5 875 897 IPR000048 GO:0005515
Rops10g01285 1639 SMART iq_5 852 874 IPR000048 GO:0005515
Rops10g01285 1639 Pfam IQ calmodulin-binding motif 877 894 IPR000048 GO:0005515
Rops10g01285 1639 Pfam IQ calmodulin-binding motif 950 970 IPR000048 GO:0005515
Rops10g01285 1639 Pfam IQ calmodulin-binding motif 902 921 IPR000048 GO:0005515
Rops10g01285 1639 Pfam Myosin head (motor domain) 483 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 Pfam Myosin head (motor domain) 66 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 CDD MYSc_Myo11 78 838 IPR036018 -
Rops10g01285 1639 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Rops10g01285 1639 Gene3D Kinesin motor domain 67 253 IPR036961 -
Rops10g01285 1639 ProSiteProfiles IQ motif profile. 949 978 IPR000048 GO:0005515
Rops10g01285 1639 SMART DIL_2 1457 1564 IPR002710 -
Rops10g01285 1639 CDD MyosinXI_CBD 1231 1605 IPR037975 GO:0007015
Rops10g01285 1639 Gene3D Kinesin motor domain 536 784 IPR036961 -
Rops10g01285 1639 ProSiteProfiles IQ motif profile. 972 1001 IPR000048 GO:0005515
Rops10g01285 1639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 849 IPR027417 -
Rops10g01285 1639 Pfam DIL domain 1458 1561 IPR002710 -
Rops10g01285 1639 Gene3D Myosin VI head, motor domain, U50 subdomain 477 535 - -
Rops10g01285 1639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 999 IPR027417 -
Rops10g01285 1639 PANTHER MYOSIN 928 1571 - -
Rops10g01285 1639 Coils Coil 1069 1089 - -
Rops10g01285 1639 ProSiteProfiles Myosin motor domain profile. 64 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01285 Rops-Chr10 25393880 25430654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01285 4 362 Myosins gene family AT4G33200 77.994 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01285 K10357 - gmx:100796413 2003.41