Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01284 ATGACATTTCGGTTTGGGGGCTTTGTTCTGGTTGTTCTCGTTTGTTTGAATTCAATCAACTTGGTGGATTCAGATGATGGAGCAACCTTGTTGGAGATAAAGAAGTCATTTAGGGACGTGGATAATGTTCTATATGATTGGACAGAATCACCATCATCAGATTATTGTGTCTGGAGAGGGGTAACATGTGATAATGTCACATTCAATGTTGTTGCACTCAATCTTTCAGGATTGAATCTTGAGGGTGAAATTTCACCTGCAATAGGGAGCCTTAACAGCTTGGTCTCTATTGATTTCAAGGAAAATCGTCTATCTGGTCAGATACCAGATGAGATTGGCGATTGTTCTTCTTTACAAAGCCTGGACTTGTCATTTAATGAGATTCATGGAGATATACCATTTTCAATTTCAAAGATGAAACAACTGGAAAATCTAATTTTGAAAAACAACCAGCTAATTGGACCAATTCCTTCAACTCTGTCCCAGATTCCTAACTTGAAGATTCTAGACCTGGCACAAAATAATCTTAGTGGGGAGATACCAAGACTTATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGTAACAATTTGGTGGGTTCACTTTCTCCAGACATATGCCAGTTAACTGGATTGTGGTATTTTGATGTGAGAAACAATAGCTTGACAGGAAGTATTCCTGAGAATATAGGCAATTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTAACTGGAGAGATACCATTCAATATTGGATTTCTGCAAATAGCGACCCTGTCATTGCAAGGCAATAAACTCTCAGGGAATATTCCATCAGTGATTGGTCTCATGCAAGCGCTTGCTGTCTTAGATTTGAGCTGTAACATGTTTAGTGGACCAATCCCTCCTATCTTGGGGAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGCCTCATCCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTAAATGACAACCATTTAAGTGGAAATATCCCGCCTGAGCTTGGAAAGCTGACTGATTTATTTGACTTAAATGTTGCTAACAACCACCTTGAGGGCCCAATTCCTGATAATATTAGCTCATGTAAAAATCTTAACAGCCTCAATGTGCATGGGAATAAGTTGAATGGAACAATCCCCTCAGCCCTTCAGAGCTTGGAGAGTATGACCTACTTGAATCTTTCTTCCAACAATCTTCAAGGCTCCATTCCAATTGAACTGTCACGGATTGGTAATTTGGATACACTGGATATTTCAAATAATAATATAAGTGGTTCTATTCCTCCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATTTAACAGGGTTTATTCCAGCAGAATTTGGTAATCTAAAGAGTGTCATGGACATAGATCTTTCAAATAATCAACTTTCTGGCTTGATTCCTGATGAACTTAGTCAGCTTCAGAACATGATATCCTTGAGGCTGGAAAACAACAAATTGTCTGGGGATGTGACATCGCTTGTAAATTGCCTTAGTCTTTCTCTGCTTAATGTCTCCTATAACAACCTGGTTGGTGTTATTCCCACAAGCAACAATTTTTCTAGGTTTTCCCCTGACAGTTTCATTGGAAACTCCGGTCTTTGTGGCTATTGGCTTAATTCTCCTTGTCATGGGTCTCACCTTGCAGAACGAGTTACGTTGTCTAAGGCAGCTATCCTAGGAATTGCTTTTGGTGCCCTTGTAATTCTTCTTATGATATTGCTGGCAGCTTTGCGACCATACAATCCAGCTCCTTTTCCTGATGGATCATTTGAGAAACCAGTTAATTACTCATCACCGAAGCTAGTGATTCTTCACATGAATATGGCACTTCATGTGTATGATGATATCATGAGGATGACTGAAAACCTGAGTGAGCAATATATAATTGGATATGGTGCATCAAGTACAGTTTATAAATGTGTTCTCAAGAATTGTAAACCAGTGGCTATCAAGAAGCTCTATTCTCACTATCCACAATACTTGAAAGAATTTGAGACCGAACTTGAGACAGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCTCCCTATGGAAACCTTCTCTTTTATGACTATATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGACCAACCAAGAAGAAAAAGCTTGATTGGGATCTTCGTCTAAAAATAGCACATGGAACAGCCCAAGGGCTTGCTTATCTACACCATGATTGCTGTCCTCGTATCATTCACAGGGATGTGAAATCATCTAATATTTTATTTGACAAAGACTTTGAGCCCCATCTCACCGATTTTGGCATTGCCAAAAGTCTATGCCCCTCCAAGTCTCACACTTCAACGTACGTAATGGGGACAATTGGCTATATAGACCCTGAATATGCTAGAACTTCCCGGCTCACTGAGAAGTCTGATGTGTATAGCTATGGTATCGTGTTACTTGAGCTGCTGACAGGGAGAAAAGCTGTTGACAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACTGCTAGTGATGCTGTAATGGAAACCGTTGATCCTGATATAAGTGCCACATGCAAAGACATGGGAGCAGTAAAAAAGGTGTTTCAGCTTGCTCTTTTATGCACAAAGAGGCGGCCAGCTGATAGGCCAACAATGCATGAGGTGACCAGGGTGCTTGGAAGTCTTTTACCATCAACACAACCATCCCCATTACAAGCACTACCTGATTCACAGGCATCTGCTAAAGTGCAATGCTACAAGGATGAGTATGCAAACCTTAAAACTCCACACTTGGTGAATTTCCCATCCATGAGCACCTCTGATGCCCAACTCTTCCTCAAGTTTGGAGAAGTAATCTCTCAAAACAGTGAGTAA 2940 0.4061 MTFRFGGFVLVVLVCLNSINLVDSDDGATLLEIKKSFRDVDNVLYDWTESPSSDYCVWRGVTCDNVTFNVVALNLSGLNLEGEISPAIGSLNSLVSIDFKENRLSGQIPDEIGDCSSLQSLDLSFNEIHGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDICQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLDLSYNQLTGEIPFNIGFLQIATLSLQGNKLSGNIPSVIGLMQALAVLDLSCNMFSGPIPPILGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNHLSGNIPPELGKLTDLFDLNVANNHLEGPIPDNISSCKNLNSLNVHGNKLNGTIPSALQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNNISGSIPPSLGDLEHLLKLNLSRNHLTGFIPAEFGNLKSVMDIDLSNNQLSGLIPDELSQLQNMISLRLENNKLSGDVTSLVNCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGYWLNSPCHGSHLAERVTLSKAAILGIAFGALVILLMILLAALRPYNPAPFPDGSFEKPVNYSSPKLVILHMNMALHVYDDIMRMTENLSEQYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQYLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGPTKKKKLDWDLRLKIAHGTAQGLAYLHHDCCPRIIHRDVKSSNILFDKDFEPHLTDFGIAKSLCPSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASDAVMETVDPDISATCKDMGAVKKVFQLALLCTKRRPADRPTMHEVTRVLGSLLPSTQPSPLQALPDSQASAKVQCYKDEYANLKTPHLVNFPSMSTSDAQLFLKFGEVISQNSE* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01284 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Rops10g01284 979 Gene3D Ribonuclease Inhibitor 297 570 IPR032675 -
Rops10g01284 979 Gene3D Phosphorylase Kinase; domain 1 617 723 - -
Rops10g01284 979 Pfam Protein kinase domain 651 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01284 979 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Rops10g01284 979 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 619 723 - -
Rops10g01284 979 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 298 570 - -
Rops10g01284 979 ProSiteProfiles Leucine-rich repeat profile. 428 451 IPR001611 GO:0005515
Rops10g01284 979 ProSiteProfiles Protein kinase domain profile. 648 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01284 979 Gene3D Ribonuclease Inhibitor 187 296 IPR032675 -
Rops10g01284 979 SMART LRR_typ_2 330 354 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 402 426 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 474 497 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 211 235 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 163 187 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 450 473 IPR003591 -
Rops10g01284 979 SMART LRR_typ_2 91 115 IPR003591 -
Rops10g01284 979 SUPERFAMILY L domain-like 25 259 - -
Rops10g01284 979 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 102 - -
Rops10g01284 979 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 187 - -
Rops10g01284 979 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Rops10g01284 979 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Rops10g01284 979 CDD STKc_IRAK 654 917 - -
Rops10g01284 979 ProSitePatterns Protein kinases ATP-binding region signature. 654 677 IPR017441 GO:0005524
Rops10g01284 979 Gene3D Ribonuclease Inhibitor 23 186 IPR032675 -
Rops10g01284 979 SUPERFAMILY Protein kinase-like (PK-like) 626 914 IPR011009 -
Rops10g01284 979 SUPERFAMILY L domain-like 262 547 - -
Rops10g01284 979 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 724 924 - -
Rops10g01284 979 SMART serkin_6 648 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01284 979 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 188 297 - -
Rops10g01284 979 Gene3D Transferase(Phosphotransferase) domain 1 724 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01284 Rops-Chr10 25384266 25391531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01284 93 978 Receptor kinase-like Gene Family AT5G07180 65.163 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Rops10g01284 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01284 K20718 - gmx:100804875 1709.89