Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01257 ATGACAGATAAAAATTCAAGACCACCGGATTCAACTGACAGTGATTTCACTAACCAGTGGCCTTTGGAGCTCTCTGAGTACTTGAAGTTTGATGATGATCCAGATGATGATCCGGAGTCATTTGCTTCTGGGCATGTTTTGAACCAGGACAATCAAGCTGATGAAGTAGGTGTCTTTGGAGGAAGTGGCAGCCACTTTGAGGGGTCTTCTAGTAGAGAAGTTAGCAGTGAAAGTGAGAAGAAGGAAGCTAGAGATAGAGTCGCGTTCAAAACCGAGTCAGAGGTTGAAATACTGGATGATGGCTTCAGGTGGAGGAAGTATGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGACGGATGCCCGGTTAAGAAGAGAGTTGAGAGAGACAGGGATGATCCAAGGTATGTGATAACAACCTATGAAGGCATCCATACTCACCCAAGTTCTTGA 477 0.4486 MTDKNSRPPDSTDSDFTNQWPLELSEYLKFDDDPDDDPESFASGHVLNQDNQADEVGVFGGSGSHFEGSSSREVSSESEKKEARDRVAFKTESEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDRDDPRYVITTYEGIHTHPSS* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01257 158 Pfam WRKY DNA -binding domain 99 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g01257 158 ProSiteProfiles WRKY domain profile. 93 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g01257 158 MobiDBLite consensus disorder prediction 27 82 - -
Rops10g01257 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 157 IPR044810 GO:0003700
Rops10g01257 158 FunFam WRKY transcription factor 57 84 158 - -
Rops10g01257 158 SUPERFAMILY WRKY DNA-binding domain 91 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g01257 158 Gene3D WRKY domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g01257 158 SMART WRKY_cls 98 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01257 Rops-Chr10 25139602 25141031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01257 35 157 WRKY Transcription Factor Family AT5G26170 56.115 9.44e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops10g01257 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01257 - - gmx:100819462 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01257 10 25139602 25141031 Rops10g01257 10 25139602 25141031 ECH