Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01251 ATGGAGGATATCGAGGAGGAAGAGAACCGAGCAGAGGAGGTGTTGGGGTCGAGCTTGACCATGGAGAAGGTGGCAGCAGCTAAAAAGTTCATTGAGAATCATTATAGGGCTCAGATGAAGAACATCCAAGAACGGAAGGAGAGGCGTTGGGTTTTAGAAAGACAACTAGCTTCTTCGGATGTGCCAAATGAGGAAAGAATCAACCTCATCAAAGATTTAGAGAGGAAGGAGACCGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTCTTGACCATCATTGGAAGGGGGGCCTTCGGGGAGGTTAGATTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTTAAGAGAGGCCAGGTGGAACATGTCAGAGCTGAGAGGAACTTGCTGGCAGAAGTTGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGACGCTGACTACTTGTATTTAATTATGGAGTATCTTCCTGGGGGTGACATTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGATGCTAGATTTTACATGGCACAGAGTGTTCTGGCCATAGAGTCTATTCACAAACACAATTACATTCACAGAGATATTAAACCTGATAACCTACTTCTGGATAAAAACGGTCACATGAAGCTCTCTGATTTTGGCCTTTGTAAGCCTCTTGATTGTATTACCTTGCCTACACTGCATGAAAATCAGACTATGGATGATGAAACTTTGGCAGAGCCCATGGATATTGATGGATCTGTTCCTGATGCGGACAATCGGAGCAGCTGGAGAAGTCCACGTGAACAGCTTCAGCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCAGACTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTAGGAGCAATAATGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGATGACCCGATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAAGATTTCCAGAAGATGCCAAGTTAACACTTGAAGCTAAGGATCTAATCTACAGGTTGCTGTGTGATGTTGATCATAGGTTGGGTACTCGAGGGGCAAATGAAATCAAGGCTCATCCTTGGTTCAAGGGTGTGGAGTGGGATAAACTCTATGAAATGGAAGCAGCATTTAAACCAAAAGTAGATGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGATCCTCCAACAGCAGCAACAACTGGGTCCGGATCCTCAAGAAAGATGCTTCTAACTCCCAAAGATCTAAACTTTGTTGGTTACACTTACAAGAACTTCGATGCTATAAAAGAAGGGCTTCGACAGTCTTTAGTTGAATTTGCAGGTGATTCAATGCAAGATTATGCTTCTAAGCGGGCAGCTGAGGAAACTGGTTTACAAATGCTTGCTGGAGATCCCATGTTACCATAA 1533 0.4286 MEDIEEEENRAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERQLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDIMTLLMREDTLSENDARFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCITLPTLHENQTMDDETLAEPMDIDGSVPDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDAKLTLEAKDLIYRLLCDVDHRLGTRGANEIKAHPWFKGVEWDKLYEMEAAFKPKVDGELDTQNFMKFDEVDPPTAATTGSGSSRKMLLTPKDLNFVGYTYKNFDAIKEGLRQSLVEFAGDSMQDYASKRAAEETGLQMLAGDPMLP* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01251 510 Gene3D Phosphorylase Kinase; domain 1 59 176 - -
Rops10g01251 510 FunFam Non-specific serine/threonine protein kinase 299 418 - -
Rops10g01251 510 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01251 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 435 - -
Rops10g01251 510 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Rops10g01251 510 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops10g01251 510 CDD STKc_NDR_like 91 465 - -
Rops10g01251 510 Gene3D Phosphorylase Kinase; domain 1 419 429 - -
Rops10g01251 510 Pfam Protein kinase domain 94 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01251 510 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01251 510 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01251 510 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Rops10g01251 510 CDD MobB_NDR_LATS-like 27 88 - -
Rops10g01251 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Rops10g01251 510 Gene3D Transferase(Phosphotransferase) domain 1 299 418 - -
Rops10g01251 510 SUPERFAMILY Protein kinase-like (PK-like) 76 447 IPR011009 -
Rops10g01251 510 Pfam Protein kinase C terminal domain 419 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Rops10g01251 510 Gene3D Transferase(Phosphotransferase) domain 1 177 241 - -
Rops10g01251 510 SMART pkinase_C_6 401 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops10g01251 510 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01251 Rops-Chr10 25092968 25101866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01251 1 480 AGC Kinase Gene Family AT4G33080 82.573 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Rops10g01251 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01251 K08790 - gmx:100815717 949.118