Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01239 ATGAAAATAGTGTTCATGGATTTGGAATGGTTGTTTCCAATTCCAAGTATCCCTTCTGTTTCAGCAATGTTCACCCTGCTTGCCTTAATTGGAGGATTGTTGGTATATCTATATGGGCCCTATTGGGGGGTAAGGAAGGTTCCAGGCCCACCATCTCTTCCGCTAATAGGACACCTTCCCTTGCTGACAAAGTATGGCCCTGATGTATTCTCAGTCCTTGCTCAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATTATTGCAGATGCAGAGCTATGTAAAGAGGCAGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGTATTCCCTCTCCTATATCTGCTTCACCTCTTCACCAAAAGGGCCTCTTCTTCACCCGGGATTCACAATGGTCTATCATGAGAAACACCGTATTGTCGGTCTACCAGCCATCACACTTGTCCAGATTAGTGCCAACAATGCAGTCATTCATAGAATCTGCAACCAAAAATCTTGACTCTCAAAAAGAAGACCTTGTCTTTTCCGATCTATCACTCAGACTTGCAACTGATGTGATTGGACAAGCTGCATTTGGTGTCAACTTTGGCCTTTCTAAGCCTCATTCAGTTTGTGATGAATTCAAGAGTCTTAAAGGGGATGCTGCAGGTGCTAGTAATGAAGTATCAGATTTCATCAATCAACATAATTACTCTACAACCCAACTTAAGATGGACTTGTCTGGTTCCTTCTCCATTATACTTGGTCTACTTGTTCCAATACTTCAGGAGCCATTTAGGCAGATTTTGAAGAGAATACCAGGCACCATGGACTGGAAAATTGAGCGTACTGACCAGAAACTAAGTGGCCGCCTTGATGAGATTGTAGAAAAAAGAATGAAAGATAGGAATAGAACTTCAAAGGATTTCTTGTCACTCATACTAAATGCTAGAGAATCAAAAGCAGTATCAGAAAATGTGTTCACTCCTGACTACATTAGTGCTGTTACTTATGAGCACCTACTTGCTGGGTCAGCAACCACGTCTTTTACCTTGTCTTCTGTTGTCTATTTGGTTGCTGGCCATCCAGAGGTTGAGAAAAAGCTGCTTCAAGAGATTGATGGGGTTGGTCCCGCTGATCAGACACCTACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGGTTTTATACTGTCTCCCCATTAGTTGCTAGAGAAACATCAAATAAAGTACAGATTGGAGGTCACCTTCTCCCAAAGGGGACTTGGGTCTGGTTAGCACTTGGAGTTCTAGCAAAGGATCCCAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATCGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCCCTGCAAGAGATCAAGCTTTCTCTGATTCATTTATACCGGAGATACTTGTTTAGGCATTCACCTAATATGGAAAACCCCTTGGAACTCGAATATGGCATAGTCCTCAACTTCAAGCACGGTGTCAAGCTCAGAGTCATAAAAAGAACAGAGAGGAGCTGCTAA 1623 0.4208 MKIVFMDLEWLFPIPSIPSVSAMFTLLALIGGLLVYLYGPYWGVRKVPGPPSLPLIGHLPLLTKYGPDVFSVLAQQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSIMRNTVLSVYQPSHLSRLVPTMQSFIESATKNLDSQKEDLVFSDLSLRLATDVIGQAAFGVNFGLSKPHSVCDEFKSLKGDAAGASNEVSDFINQHNYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTDQKLSGRLDEIVEKRMKDRNRTSKDFLSLILNARESKAVSENVFTPDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVEKKLLQEIDGVGPADQTPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSNKVQIGGHLLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRRYLFRHSPNMENPLELEYGIVLNFKHGVKLRVIKRTERSC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01239 540 Pfam Cytochrome P450 48 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Rops10g01239 540 PANTHER THROMBOXANE-A SYNTHASE 18 537 - -
Rops10g01239 540 SUPERFAMILY Cytochrome P450 41 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 Gene3D Cytochrome P450 37 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01239 540 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01239 Rops-Chr10 24967148 24974090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01239 85 535 Cytochrome P450 AT2G26170 74.723 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01239 K20771 - gmx:100797803 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01239 10 24967148 24974090 Rops10g01239 10 24967148 24974090 ECH
Rops9g02046 9 37695356 37699878 Rops10g01239 10 24967148 24974090 PCT