Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01237 ATGAGTGGTGAGGATGATGGGGACCCAGAAAGAAGGAGATTGAAATTAAGACAAGAAGCGTTGAATTTGAAGCCTAATTCTCGGTTCAGCAACTTCCACCGTGATCTTATGGCTGGGGCGGTGATGGGTGGGGTGGTGCACACCATTGTGGCCCCAATTGAGAGGGCAAAACTCTTGTTGCAAACCCAAGAAAGCAATTTGGCAATTGTTGCCAGTGGACGTCGCAAATTCAAGGGCATGTTGGATTGCATAATACGTACAGTTAGGGAAGAAGGTATTCTCTCTTTGTGGCGAGGCAATGGTAGCAGTGTTCTTCGCTATTATCCTTCCGTTGCACTCAATTTCTCTCTTAAGGATCTTTACAGAAGCATTTTAAGAGATGGAAACTCTCATGACAATAGTATCTTCTCTGTTGCATCCGCTAATTTTGTTGCTGGGGCTGCAGCTGGTTGTACAACACTTGTCTTGGTATACCCCCTTGATATTGCACACACCCGCCTGGCTGCTGACATTGGAAGAACAGAAGTGCGTCAATTTCGAGGCATTTACCATTTCTTGGCTACCATATTCCATAAGGATGGGATCAGAGGTATTTACAGGGGCCTTCCTGCATCCCTACATGGGATGGTGGTACACAGAGGCCTTTATTTTGGAGGCTTTGATACCATGAAAGAGATGTTGTCTGAGGAATCAAAACCTGAGTTGGCATTATGGAAGCGTTGGTCGGTAGCTCAGGCAGTCACAACCTCTGCTGGGTTGATATCTTATCCATTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGCTTGGAACAACCAGTGTACAATGGCACCTTGGACTGTTGGAAGAAGATATATAGGACAGAAGGGTTTGCTTCATTTTACCGTGGAGCAGTTTCAAATGTGTTTAGGAGCACAGGGGCTGCAGCTATCTTAGTCTTGTATGATGAAGTTAAGAAATTTATGAACTGGAGGCGATTGTAA 987 0.4529 MSGEDDGDPERRRLKLRQEALNLKPNSRFSNFHRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMLDCIIRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRSILRDGNSHDNSIFSVASANFVAGAAAGCTTLVLVYPLDIAHTRLAADIGRTEVRQFRGIYHFLATIFHKDGIRGIYRGLPASLHGMVVHRGLYFGGFDTMKEMLSEESKPELALWKRWSVAQAVTTSAGLISYPLDTVRRRMMMQSGLEQPVYNGTLDCWKKIYRTEGFASFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWRRL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01237 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 226 IPR018108 -
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 244 266 IPR002067 GO:0055085
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 99 119 IPR002067 GO:0055085
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Rops10g01237 328 PRINTS Mitochondrial carrier protein signature 152 170 IPR002067 GO:0055085
Rops10g01237 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 322 IPR018108 -
Rops10g01237 328 PRINTS Adenine nucleotide translocator signature 32 44 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 PRINTS Adenine nucleotide translocator signature 240 256 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 PRINTS Adenine nucleotide translocator signature 77 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 PRINTS Adenine nucleotide translocator signature 110 122 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 PRINTS Adenine nucleotide translocator signature 137 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 FunFam probable ADP,ATP carrier protein At5g56450 34 325 - -
Rops10g01237 328 Pfam Mitochondrial carrier protein 31 126 IPR018108 -
Rops10g01237 328 Pfam Mitochondrial carrier protein 237 324 IPR018108 -
Rops10g01237 328 Pfam Mitochondrial carrier protein 141 229 IPR018108 -
Rops10g01237 328 Gene3D Mitochondrial carrier domain 34 327 IPR023395 -
Rops10g01237 328 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 30 326 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops10g01237 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 124 IPR018108 -
Rops10g01237 328 SUPERFAMILY Mitochondrial carrier 30 318 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01237 Rops-Chr10 24907098 24912063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01237 29 320 Antiporters AT5G13490 40.268 2.52e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01237 K05863 - gmx:100797251 556.599