Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01229 ATGTTTTTTTTCGAGGATCTCTTGCCACTGCTCCAGCACCTCGTTGGAAAAACTCCTCAATCCTCAGAAAAAGCATCCTTCTTTCAACAATCCATGGGGGATTCAAGTTGTGGAGGCACCGAGTCAGAACTGTGTCGAGACGAGTCAGCCGCGTTCGTTCTCAAGTTCGTTGCCATGGCATCAATTCTCTTGGCGGGCATGGCCGGAATCGCCATCCCTCTCGTCGGAAAACATCGCCGGTTCCTCCGTACCGACGGGAACGTCTTCGTGGCAGCGAAAGCTTTCGCGGCGGGGGTGATTCTTGCCACCGGTTTCGTACACATGCTCTCCGATGCATCAGAGGCGCTCGAAAGTCCTTGCTTGCCGGCATTCCCGTGGCACAAGTTCCCGTTCGTTGGGTTCTTCGCTATGATGGCGGCGCTTTTCACTCTCCTCCTTGACTTCGTCGGAACTCAGTATTACGAGCGTAAACAGGGGATGAATCGTGCCGCCGACGAGCTAACTCGGGTCGGGTCGTCGGAATCCGGGAACGGAGACTGGTCTTCCGGGAAGGTGTTTGGTGAAGAGGAAAGTGGTGGAATGCACATAGTGGGGATGCATGCACACGCGGCGCACCATAGACATAACCACCCTCATGGCCAAGACGCATGCCACGGCATTGGCGCCGTCAAAGAACACGGCCATTCACACGGGCACGCCCTCGTAACTGACGAGGAAACTGACGTCCGACACGTCGTCGTTTCACAGGTGTTGGAGCTTGGGATTGTATCACATTCGGTTATAATTGGGTTGTCTCTTGGAGTTTCACAAAGCCCTTGTACTATAAGACCTTTGATTGCTGCATTATCCTTCCATCAATTCTTTGAAGGGTTTGCACTTGGAGGTTGCATATCCCAGGCACAGTTTAAGACCTCATCGGCAACGATAATGGCTTGTTTTTTTGCACTAACTACGCCGGTGGGTGTTGGAATCGGAACAAGTATTGCTTCGGGGTATAACCCTAACAGTTCAGGTGCACTCATCACGGAAGGTATATTGGATTCATTGTCAGCTGGAATTTTAGTGTATATGGCTTTGGTAGATTTGATAGCAGCTGATTTTCTTAGCAAAAGAATGAGTTGTAACTTTAGGCTGCAGATAGTATCTTATTGTATGCTTTTCCTAGGAGCTGGATCAATGTCTTCACTCGCAATATGGGCCTGA 1203 0.5054 MFFFEDLLPLLQHLVGKTPQSSEKASFFQQSMGDSSCGGTESELCRDESAAFVLKFVAMASILLAGMAGIAIPLVGKHRRFLRTDGNVFVAAKAFAAGVILATGFVHMLSDASEALESPCLPAFPWHKFPFVGFFAMMAALFTLLLDFVGTQYYERKQGMNRAADELTRVGSSESGNGDWSSGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGQDACHGIGAVKEHGHSHGHALVTDEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPVGVGIGTSIASGYNPNSSGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGSMSSLAIWA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01229 400 PANTHER ZINC/IRON TRANSPORTER 53 393 - -
Rops10g01229 400 Pfam ZIP Zinc transporter 53 397 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops10g01229 400 NCBIfam ZIP zinc/iron transport family 38 400 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01229 Rops-Chr10 24821580 24823428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01229 37 400 Inorganic Solute Cotransporters AT1G60960 69.372 6.89e-178 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01229 K14709 - gmx:100812212 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02058 9 37822279 37829024 Rops10g01229 10 24821580 24823428 PCT