Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01158 ATGCAATCAAGTAGTGTTGTGTGTTCCTCAAATTCGTTGTTTGGTTCAGCAGCCGTCACTGCCACTCTTCCCTCTTCTCTTAGATTCCCTCAACAACTCTTCTTAAAAATCGCAAATCCAACATCTTCTTCGATTCGCTTACGAAATTGTCAACCTCTTCGCTCCTCTGCTTCATCTAGTGACTCGCCCCAAGTTAGTGAAATGGCTTCAAAGAATTTTCAAGATCCACGCATAGCTAAAATCTCTACTGCGATCCGTGTCATCCCCAACTTTCCTAAGCCAGGTATTATGTTTCAAGATATAACTACGCTGCTTCTTGATACAAAGGCTTTCAAAGATACGATTGACTTGTTCGTTGAGAGGTACAGGGACCAAAATATTTCTGTTGTGGCAGGTGTTGAAGCAAGAGGCTTTATATTTGGCCCGCCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCAATGAGGAAGCCCAATAAATTACCAGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTACGGAACTGACAAAATGGAGATGCATGTGGGAGCTGTACAACATGGAGAACGAGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACATTATCTGCAGCAATTAAGCTACTAGAACGTGTTGGGGCACATGTTGTTGAGTGTGCTTGTGTGATTGAATTACCGGAGTTAAAGGGGCGGGAAAGGCTTGGAGGCAAGTCGCCGCTATTCGTCTTAGTTAATGGAGCCTGA 753 0.4382 MQSSSVVCSSNSLFGSAAVTATLPSSLRFPQQLFLKIANPTSSSIRLRNCQPLRSSASSSDSPQVSEMASKNFQDPRIAKISTAIRVIPNFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQHGERALVIDDLIATGGTLSAAIKLLERVGAHVVECACVIELPELKGRERLGGKSPLFVLVNGA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01158 250 Gene3D - 68 248 IPR029057 -
Rops10g01158 250 FunFam Adenine phosphoribosyltransferase 1 69 249 - -
Rops10g01158 250 NCBIfam adenine phosphoribosyltransferase 82 248 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops10g01158 250 CDD PRTases_typeI 115 246 IPR000836 -
Rops10g01158 250 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 72 248 - -
Rops10g01158 250 Pfam Phosphoribosyl transferase domain 107 232 IPR000836 -
Rops10g01158 250 SUPERFAMILY PRTase-like 80 241 IPR029057 -
Rops10g01158 250 Hamap Adenine phosphoribosyltransferase [apt]. 81 249 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01158 Rops-Chr10 23741151 23745251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01158 68 250 PRT Gene Family AT1G27450 80.874 6.82e-109 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01158 K00759 - gmx:100305792 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01158 10 23741151 23745251 Rops10g01158 10 23741151 23745251 ECH